Arabidopsis small RNA Gene Analysis

The basic information for the gene you have selected is displayed below. The "small RNA Information" section sums the reads that map to either strand of the gene of interest, indicating the total (normalized) read abundance, the count of distinct (different) sequences, and providing links to a downloadable file with that information, and web pages that provide detailed information on the complete set of individual sequences derived from the gene. View a legend that explains the icons and colors in the image below. Adjust libraries/reads or change display options on the control panel. In the control panel, you can show a special "phasing analysis" for small RNAs in this region.



ACTTGTTGGAATCGCATCGTCATAACTTGTTGGAATCGCATCGTCATCTTTACAAAAAATTTCATGTGCTGTTAAGTATTCTATTTAGTCGAGATTAAATAAATAGAACTACTAGCTTCTGTGAATATGAAATAGTGTATAAAGACTGTGAATATGAAATTTGGCAAAAAAAAAAAAACTTGGATGTATAGCTTTTTGGCTTTGTCTACCAAATTGGTTTAAGGGACTAGGGTTACTTGGATGGTAGACAAAGGGACTAGGGAAACTTATGAATTACCGAGAATGGAACGCAATTAGGCTAGAGAGGTGGAACGCAATTAGGCTAAGGTGGAACGCAATTAGGCTAGCAGGTGGAACGCAATTAGGCTACGGTCGCAGGTGGAACGCAAGACGGTCGCAGGTGGAACGCAAGACGGTCGCAGGTGGAACGCGAGACGGTCGCAGGTGGAACGAAGAGACGGTCGCAGGTGGAAAAAGAGACGGTCGCAGGTGAAAAGAGACGGTCGCAGGTGGTGAAAAGAGACGGTCGCAGGTCCCGAGAGTTCGACTCTGCCGCTCGGGTGAAAAGAGACGGTCTCTCGGGTGAAAAGAGACGGTTCTCGGGTGAAAAGAGACGGTCCTCTCGGGTGAAAAGAGACGGCTCTCGGGTGAAAAGAGACGGTACTCTCGGGTGAAAAGAGACGACTCTCGGGTGAAAAGAGACGGTTCGACTCTGCCGCATATATGGAACTCTCGGGTGAAAAGAGACGGTTCGACTCTGCCGCATATATGGCTTCGACTCTGCCGCATATATGGCCTCTGCCGCATATATGGCTTGGAGTCGAACTCTCGGGTGGCAGAGTCGAACTCTCGGGTGCATATATGCGGCAGAGTCGAATTATTTATTTATTACCTCGTCTTATTTATTTATTACCTCGTCTTATTTATTTATTACCTCGTCTATTTATTTATTACCTCGTCTCTTTATTTATTACCTCGTCTCAATTTATTACCTCGTCTCATGGTTTATTACCTCGTCTCATGGTTTATTACCTCGTCTCATGGTTAAATAAATAAAATTTGGGCGGCATGGTTGGCAGCAGTTTTAGAACCATGAGACGAGGTAATAAATACTGCTGCCAACCATGAGACGAGCACGTGTGACGTGTTGAGCATTCAGCTGGAACAGCAAGATCTTGATGAATTAATTTCAGCTGGAACAGCAAGATTAATTTCAGCTGGAACAGCAAGATGACTTTTATGATGTAAGACGATACAGTAGAAGGATCGTCTTACTATACAGTAGAAGGATCGTCTTATACAGTAGAAGGATCGTCTTACATCATAGACCAAAACAAATCTGAGCATTTAAACGGTTTATAAAAAAAGAAATTCTAAGGAACAATGCAGAAAGAGAAGCTAAGGAACAATGCAGAAAGCTAAGGAACAATGCAGAAAAGCTAAGGAACAATGCAGAAACAAGCTAAGGAACAATGCAGACAAGCTAAGGAACAATGCAGAATCAAGCTAAGGAACAATGCAGTCAAGCTAAGGAACAATGCAGACTCAAGCTAAGGAACAATGCAGAAAGAGACTCAAGCTAAGGAACAATGCAGAAAGAGGCAAGAACTCAAGCTAAGGAACGCAAGAACTCAAGCTAAGGAATCGCAAGAACTCAAGCTAAGATCGCAAGAACTCAAGCTAAGGAACAATGAAGATCGCAAGAACTCAAGCTCCATATAACACCTATGCGCGACATATGGTAAAGATCGCAAGAATTATATGGTAAAGATCGCAAGAGTTATATGGTAAAGATCGCAATGTTATATGGTAAAGATCGCAACACAAAGTAACGTGTAGCCAAGGACAACAAAGTAACGTGTAGCCAAGTAACGTGTAGCCAAGGACAAGTAACGTGTAGCCAAGGACAACTTTTGTGTCGCGCATAGGTGTTACTTTGTGTCGCGCATAGGTGTTAAACGTGTAGCCAAGGACAACTTTACTTTGTGTCGCGCATAGGTTACTTTGTGTCGCGCATAGGTTTACTTTGTGTCGCGCATAGGTGTTACTTTGTGTCGCGCATAGGTGTGTTACTTTGTGTCGCGCATAGCGTTACTTTGTGTCGCGCATAGCACGTTACTTTGTGTCGCGCATAGCCAAGGACAACTTGCCGATAGCCAAGGACAACTTGCCGATCAAGCCAAGGACAACTTGCCGATCATTACACGTTACTTTGTGTCGCGCAAAGGACAACTTGCCGATCATGAAGGACAACTTGCCGATCATGTTAAAGGACAACTTGCCGATCATGTTACTGGCTACACGTTACTTTGTGTCGTGGCTACACGTTACTTTGTGTCGCGAGGACAACTTGCCGATCATGTTACTTGGCTACACGTTACTTTGTTTGGCTACACGTTACTTTGTGTGTCCTTGGCTACACGTTACTTTGTCCTTGGCTACACGTTACGTTGTCCTTGGCTACACGTGTTGTCCTTGGCTACACGTTAGTTGTCCTTGGCTACACGTTACTTAGTTGTCCTTGGCTACACGTTACTTTGCCGATCATGTTACTTTTTAAGTTGTCCTTGGCTACAAAGTTGTCCTTGGCTACACGAAGTTGTCCTTGGCTACACGTAAGTTGTCCTTGGCTACACGTTAAAGTTGTCCTTGGCTACACGTTACCAAGTTGTCCTTGGCTACCAAGTTGTCCTTGGCTACACAAGTTGTCCTTGGCTACACCAAGTTGTCCTTGGCTACACGCAAGTTGTCCTTGGCTACACGTCAAGTTGTCCTTGGCTACACGTTCAAGTTGTCCTTGGCTACACGTTAGCAAGTTGTCCTTGGCTAGCAAGTTGTCCTTGGCTACGCAAGTTGTCCTTGGCTACAGCAAGTTGTCCTTGGCTACACGGCAAGTTGTCCTTGGCTGGCAAGTTGTCCTTGGCTAGGCAAGTTGTCCTTGGCTACGGCAAGTTGTCCTTGGCTACAGGCAAGTTGTCCTTGGCTACACCGGCAAGTTGTCCTTGGCCGGCAAGTTGTCCTTGGCTCGGCAAGTTGTCCTTGGCTACGGCAAGTTGTCCTTGGCTACCGGCAAGTTGTCCTTGGCTACACGGCAAGTTGTCCTTGGCTACACGTCGGCAAGTTGTCCTTGGCTATCGGCAAGTTGTCCTTGGCTACTCGGCAAGTTGTCCTTGGCTACAATCGGCAAGTTGTCCTTGGATCGGCAAGTTGTCCTTGGCATCGGCAAGTTGTCCTTGGCTATCGGCAAGTTGTCCTTGGCTAATCGGCAAGTTGTCCTTGGCTACATCGGCAAGTTGTCCTTGGCTACACATGTTACTTTTTCTTTTTGGTTTGATCGGCAAGTTGTCCTTGGCTAGATCGGCAAGTTGTCCTTGGCTACGATCGGCAAGTTGTCCTTGGCTACATGATCGGCAAGTTGTCCTTGGCTGATCGGCAAGTTGTCCTTGGCTTGATCGGCAAGTTGTCCTTGGCTATGATCGGCAAGTTGTCCTTGGCTACTGATCGGCAAGTTGTCCTTGGCTACAATGATCGGCAAGTTGTCCTTGGCATGATCGGCAAGTTGTCCTTGGCTATGATCGGCAAGTTGTCCTTGGCTACATGATCGGCAAGTTGTCCTTGGCTACACATGATCGGCAAGTTGTCCTTGGCTACATGATCGGCAAGTTGTCCTTGGCTACAAACATGATCGGCAAGTTGTAACATGATCGGCAAGTTGTCCAACATGATCGGCAAGTTGTCCTTAACATGATCGGCAAGTTGTCCTTGAACATGATCGGCAAGTTGTCCTTGGCTAACATGATCGGCAAGTTGTCCTTGGCTAAACATGATCGGCAAGTTGTCCTTGGCTACAAACATGATCGGCAAGTTGTCCTTGGCTACACTAACATGATCGGCAAGTTGTCGTAACATGATCGGCAAGTTGGTAACATGATCGGCAAGTTGTCCTAGTAACATGATCGGCAAGTTGAGTAACATGATCGGCAAGTTGTAGTAACATGATCGGCAAGTTGTCCAGTAACATGATCGGCAAGTTGTCCTAAGTAACATGATCGGCAAGTTAAGTAACATGATCGGCAAGTTGAAGTAACATGATCGGCAAGTTGTCAAGTAACATGATCGGCAAGTTGTCCTTGGCTACAAAAGTAACATGATCGGCAAGTAAAGTAACATGATCGGCAAGTTGTAAAAGTAACATGATCGGCAAGAAAAGTAACATGATCGGCAAGTTAAAAGTAACATGATCGGCAAGTTGAAAAAGTAACATGATCGGCAAAAAAAGTAACATGATCGGCAAGAAAAAGTAACATGATCGGCAAGTTGAAAAAGTAACATGATCGGCGAAAAAGTAACATGATCGGCAAGAAAAAGTAACATGATCGGCAGAAAAAGTAACATGATCGGCAAGAAGAAAAAGTAACATGATCGGCAAAAAGAAAAAGTAACATGATCGGCAAAGAAAAAGTAACATGATCGGCAAAAAGAAAAAGTAACATGATCGGCAAAAAGAAAAAGTAACATGATCGAAAAAGAAAAAGTAACATGATCGGCAAAAAGAAAAAGTAACATGAAACCAAAAAGAAAAAGTAACATGAAAACCAAAAAGAAAAAGTAACATTTCCGTATAAAATACAAGATAATTCCGTATAAAATACAAGATAATATATCCTAATTTCTTCCTGAAATATATCCTAATTTCTTCCTGTTATTCCGTATAAAATACAAGATATATCCTAATTTCTTCCTGAATCCTTCACTAATTTCTTCCTGAATCCTTGGAAGAAATTAGGATATATTAAGGAAGAAATTAGGATATATTTCAGGAAGAAATTAGGATATATTCAGGAAGAAATTAGGATATAATTCAGGAAGAAATTAGGATAATTCAGGAAGAAATTAGGATATCTTCAAAAAAAAAAAAAAAAAAGGATTCAGGAAGAAATTAGGATTTCAAAAAAAAAAAAAAAAAAAAAAGGATTCAGGAAGAAATTAGGATAAGGATTCAGGAAGAAATTAGGATATCAAAAAAAAAAAAAAAAATCAAAAAAAAAAAAAAAAAATCAAAAAAAAAAAAAAAAAAATCAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAGAAGGATTCAGGAAGAAATTAGGGAAGGATTCAGGAAGAAATTAGGAGAAGGATTCAGGAAGAAATTAGGATGAAGGATTCAGGAAGAAATTAGGATAGAAGGATTCAGGAAGAAATTAGGATATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAGTTAAAAAAAAAAAAAAAAAAAGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAGTTTTTGAAGGATTCAGGAAGAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAGTTTTTGAAGGATTCAGGAAGAATTTTTGAAGGATTCAGGAAGATTTTTTGAAGGATTCAGGAAGTTTTTTTGAAGGATTCAGGAATTTTTTTTGAAGGATTCAGGATTTTTTTTTGAAGGATTCAGGTTTTTTTTTTGAAGGATTCAGTTTTTTTTTTTTTGAAGGATTTTTTTTTTTTTTTTTTTTTAGTTTGAAACTAAATTGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAGAGTATAAAGAAAGAATAGAGTATAAAGAAAGATCAAAAGAAAGATCATTTAAATCGGCAAAAGAAAGATCATTTAAATCGGCAAAAGAAAGATCATTTAAATCGGAAGAAAGATCATTTAAATCGGCAAGAAAGATCATTTAAATCGGCAAGAAAGATCATTTAAATCGGAGAAAGATCATTTAAATCGGCAGAAAGATCATTTAAATCGGCAAGAAAGATCATTTAAATCGGCAAGAGAAAGATCATTTAAATCGGCAAGTCAGAAAGATCATTTAAATCGGCAAGTCATTTATACTCTATTAAGACAATGAAAGATCATTTAAATCGGCAGAAAGATCATTTAAATCGGCAAGTCATAAAGATCATTTAAATCGGCAAAAGATCATTTAAATCGGCAAAGATCATTTAAATCGGCAAGTAGATCATTTAAATCGGCAAGTCATGATCATTTAAATCGGCAAGTCATCATTTAAATCGGCAAGTCATCATTTAAATCGGCAAGTCATATTTAAATCGGCAAGTCATTTTAAATCGGCAAGTCATCCTAAATGATCTTTCTTTATACTCTAAATCGGCAAGTCATCCTTGGCTAATCGGCAAGTCATCCTTGGCTGCTTTAAATGATCTTTCTTTATCGGCAAGTCATCCTTGGCTGCACAAAGTCATCCTTGGCTGCACACTATCATCCTTGGCTGCACACTACATCCTTGGCTGCACACTACTTATGACTTGCCGATTTAAATGACTTGGCTGCACACTACTTTCGTCTTGGCTGCACACTACTTTCGTTTGGCTGCACACTACTTTCGTCTTGGCTGCACACTACTTTCGTCACCCAAGGATGACTTGCCGACCAAGGATGACTTGCCGATTTGCCAAGGATGACTTGCCGGCCAAGGATGACTTGCCGAGCCAAGGATGACTTGCCGATAGCCAAGGATGACTTGCCAGCCAAGGATGACTTGCCGAGCCAAGGATGACTTGCCGAAGCCAAGGATGACTTGCCGATAGCCAAGGATGACTTGCCGATTCAGCCAAGGATGACTTGCCAGCCAAGGATGACTTGCCCAGCCAAGGATGACTTGCCGCAGCCAAGGATGACTTGCCGACAGCCAAGGATGACTTGCCGATCAGCCAAGGATGACTTGCCGATTCAGCCAAGGATGACTTGCCGATTTGCAGCCAAGGATGACTTGCGCAGCCAAGGATGACTTGCCGCAGCCAAGGATGACTTGCCGGCAGCCAAGGATGACTTGCCGATGCAGCCAAGGATGACTTTGCAGCCAAGGATGACTTGTGCAGCCAAGGATGACTTGCTGCAGCCAAGGATGACTTGCCTGCAGCCAAGGATGACTTGCCGTGCAGCCAAGGATGACTTGCCGATGCAGCCAAGGATGACTTGCCGATCACTACTTTCGTCACATTCGCCACTACTTTCGTCACATTCGCGTACTACTTTCGTCACATTCGCACTACTTTCGTCACATTCGCGACTACTTTCGTCACATTCGCGTTGTGCAGCCAAGGATGACTTGCTACTTTCGTCACATTCGCGTCTACTTTCGTCACATTCGCGTTGTGTGCAGCCAAGGATGACTGTGTGCAGCCAAGGATGACTTAGTGTGCAGCCAAGGATGACTACTTTCGTCACATTCGCGTTTACTTTCGTCACATTCGCGTTTCACTTTCGTCACATTCGCGTTTCATTCGTCACATTCGCGTTTCACTAGAAAGTAGTGTGCAGCCAAGGACGAAAGTAGTGTGCAGCCAAGACGAAAGTAGTGTGCAGCCACGAAAGTAGTGTGCAGCCAATCACATTCGCGTTTCACTAGCGACGAAAGTAGTGTGCAGCCGACGAAAGTAGTGTGCAGCCAGACGAAAGTAGTGTGCAGCCAAGACGAAAGTAGTGTGCAGCCAAGGTGACGAAAGTAGTGTGCAGCTGACGAAAGTAGTGTGCAGCCTGACGAAAGTAGTGTGCAGCCAAGATTCGCGTTTCACTAGCTATATGTGACGAAAGTAGTGTGCAGTGTGACGAAAGTAGTGTGCAGCTGTGACGAAAGTAGTGTGCAGCCATGTGACGAAAGTAGTGTGCAATGTGACGAAAGTAGTGTGCAGCCAATGTGACGAAAGTAGTGTGAATGTGACGAAAGTAGTGTGCAATGTGACGAAAGTAGTGTGCAAATGTGACGAAAGTAGTGTGCAGCGAATGTGACGAAAGTAGTGTGCGAATGTGACGAAAGTAGTGTCGAATGTGACGAAAGTAGTGTGCGAATGTGACGAAAGTAGTGTGCACGTTTCACTAGCTATACCCACTGCGAATGTGACGAAAGTAGTGTGCGAATGTGACGAAAGTAGTGTGGCGAATGTGACGAAAGTAGTGTGCACGCGAATGTGACGAAAGTAGTGTGACGCGAATGTGACGAAAGTAGTGTTTTCACTAGCTATACCCACTTTTTCACTAGCTATACCCACTTGAACGCGAATGTGACGAAAGTAGTGAAACGCGAATGTGACGAAAGAGTGAAACGCGAATGTGACGATAGTGAAACGCGAATGTGACGCTAGTGAAACGCGAATGTGACAGCTAGTGAAACGCGAATGTGACGTATACCCACTTGTATATATGATGGGTATAGCTAGTGAAACGCTGGGTATAGCTAGTGAAACGCGGTGGGTATAGCTAGTGAAACGCCAAGTGGGTATAGCTAGTGAACAAGTGGGTATAGCTAGTGAAACAAGTGGGTATAGCTAGTGAAACGACAAGTGGGTATAGCTAGTGAACAAGTGGGTATAGCTAGTGAAACTACAAGTGGGTATAGCTAGTGTACAAGTGGGTATAGCTAGTGAATACAAGTGGGTATAGCTAGTGTATACAAGTGGGTATAGCTAGTTATATACAAGTGGGTATAGCTTTTTCATATATACAAGTGGGTCAAAAGAAAAATGTATGTGTTTTCTTTTGTTTGTGGTTTTCATTTCTTTTGTTTGTGGTTTTCTTTCTTTTGTTTGTGGTTTTCAAATGTATGTGTTTTGTATGTTATGTATGTGTTTTGTATGTTTTGTATGTGTTTTGTATGTTTCTGTGTTTTGTATGTTTCTTCTTTTTGTATGTTTCTTCTCGAAAACACATACATTTTTCTTTTGATGTTTCTTCTCGAAAGTAACAAAGAAACATACAAAACACATAGAGAAGAAACATACAAAACACATAAAGTAACAATAGAGAATGGAAAGTAACAATAGAGAATGGAATTTCGAGAAGAAACATACAAAATAACAATAGAGAATGGAAGAGTAACAATAGAGAATGGAAGAGGAACAATAGAGAATGGAAGAGGAGAACAATAGAGAATGGAAGAGGATTACTTTCGAGAAGAAACATACAATAGAGAATGGAAGAGGAGAATAGAGAATGGAAGAGGAGAATAGAGAATGGAAGAGGAGATATTGTTACTTTCGAGAAGAAACATAGAGAATGGAAGAGGAGATCAGAGAATGGAAGAGGAGATCTCGAGAATGGAAGAGGAGATCTCAGAATGGAAGAGGAGATCTCTATCTATTGTTACTTTCGAGAAGAGAATGGAAGAGGAGATCTCGAATGGAAGAGGAGATCTCTAAATGGAAGAGGAGATCTCTACAATGGAAGAGGAGATCTCTACAATGGAAGAGGAGATCTCTACATGGAAGAGGAGATCTCTACATAGGAAGAGGAGATCTCTACATAAAGAGGAGATCTCTACATATTAGAGGAGATCTCTACATATTTAGGAGATCTCTACATATTTGTAGATCTCCTCTTCCATTCTCTTAGAGATCTCCTCTTCCATTCTGTAGAGATCTCCTCTTCCATTATGTAGAGATCTCCTCTTCCATTTATGTAGAGATCTCCTCTTCCTATGTAGAGATCTCCTCTTCCAAAATATGTAGAGATCTCCTCAAATATGTAGAGATCTCCTAACAAATATGTAGAGATCTCCAAACAAATATGTAGAGATCTCCTAAAACAAATATGTAGAGATCTCCAAAACAAATATGTAGAGATCCAAAACAAATATGTAGAGATCTCCAAAACAAATATGTAGAGATCTCGTGCTTATGAATACTAGAGGAAGCACCAAAACAAATATGTAGAGATTATGAATACTAGAGGACTTATTATGAATACTAGAGGACTTACAAGCACCAAAACAAATATGTAGAGATAAGCACCAAAACAAATATGATAAGCACCAAAACAAATATGTAATACTAGAGGACTTACCCGCTCTGTAGAGGACTTACCCGCTCTGGGGAGGACTTACCCGCTCTGGGTAGGACTTACCCGCTCTGGGTTTATAGAAGATGGGTCAGAGATTCTTATCTCTGACCCATCTTCTCTCTTATCTCTGACCCATCTTTCTCTTATCTCTGACCCATCTTAATATATGACAACTGTTTTAATATATGACAACTGTTTClick to see list of reads 4,358,168 - 4,358,377 4,358,350 - 4,358,559 4,358,381 - 4,358,590 4,358,447 - 4,358,656 4,358,457 - 4,358,666 4,358,460 - 4,358,669 4,358,498 - 4,358,707 4,358,499 - 4,358,708 4,358,500 - 4,358,709 4,358,501 - 4,358,710 4,358,504 - 4,358,713 4,358,505 - 4,358,714 4,358,506 - 4,358,715 4,358,520 - 4,358,729 4,358,615 - 4,358,824 4,358,739 - 4,358,948 4,359,003 - 4,359,212 4,359,006 - 4,359,215 4,359,017 - 4,359,226 4,359,026 - 4,359,235 4,359,085 - 4,359,294 4,359,092 - 4,359,301 4,359,110 - 4,359,319 4,359,133 - 4,359,342 4,359,152 - 4,359,361 4,359,155 - 4,359,364 4,359,165 - 4,359,374 4,359,166 - 4,359,375 4,359,167 - 4,359,376 4,359,168 - 4,359,377 4,359,170 - 4,359,379 4,359,171 - 4,359,380 4,359,172 - 4,359,381 4,359,173 - 4,359,382 4,359,176 - 4,359,385 4,359,190 - 4,359,399 4,359,192 - 4,359,401 4,359,196 - 4,359,405 4,359,205 - 4,359,414 4,359,206 - 4,359,415 4,359,207 - 4,359,416 4,359,209 - 4,359,418 4,359,211 - 4,359,420 4,359,216 - 4,359,425 4,359,220 - 4,359,429 4,359,227 - 4,359,436 4,359,237 - 4,359,446 4,359,268 - 4,359,477 4,359,277 - 4,359,486 4,359,278 - 4,359,487 4,359,279 - 4,359,488 4,359,283 - 4,359,492 4,359,287 - 4,359,496 4,359,306 - 4,359,515 4,359,307 - 4,359,516 4,359,310 - 4,359,519 4,359,312 - 4,359,521 4,359,313 - 4,359,522 4,359,314 - 4,359,523 4,359,315 - 4,359,524 4,359,316 - 4,359,525 4,359,318 - 4,359,527 4,359,320 - 4,359,529 4,359,321 - 4,359,530 4,359,322 - 4,359,531 4,359,324 - 4,359,533 4,359,326 - 4,359,535 4,359,327 - 4,359,536 4,359,329 - 4,359,538 4,359,354 - 4,359,563 4,359,358 - 4,359,567 4,359,370 - 4,359,579 4,359,371 - 4,359,580 4,359,394 - 4,359,603 4,359,421 - 4,359,212 4,359,420 - 4,359,211 4,359,418 - 4,359,209 4,359,361 - 4,359,152 4,359,354 - 4,359,145 4,359,352 - 4,359,143 4,359,350 - 4,359,141 4,359,344 - 4,359,135 4,359,340 - 4,359,131 4,359,337 - 4,359,128 4,359,312 - 4,359,103 4,359,301 - 4,359,092 4,359,288 - 4,359,079 4,359,276 - 4,359,067 4,359,275 - 4,359,066 4,359,260 - 4,359,051 4,359,254 - 4,359,045 4,359,250 - 4,359,041 4,359,249 - 4,359,040 4,359,248 - 4,359,039 4,359,244 - 4,359,035 4,359,235 - 4,359,026 4,359,234 - 4,359,025 4,359,233 - 4,359,024 4,359,224 - 4,359,015 4,359,223 - 4,359,014 4,359,222 - 4,359,013 4,359,221 - 4,359,012 4,359,220 - 4,359,011 4,359,218 - 4,359,009 4,359,217 - 4,359,008 4,359,216 - 4,359,007 4,359,215 - 4,359,006 4,359,213 - 4,359,004 4,359,208 - 4,358,999 4,359,207 - 4,358,998 4,359,206 - 4,358,997 4,359,204 - 4,358,995 4,359,203 - 4,358,994 4,359,202 - 4,358,993 4,359,201 - 4,358,992 4,359,199 - 4,358,990 4,359,193 - 4,358,984 4,359,178 - 4,358,969 4,359,166 - 4,358,957 4,359,126 - 4,358,917 4,359,123 - 4,358,914 4,359,122 - 4,358,913 4,359,121 - 4,358,912 4,359,120 - 4,358,911 4,359,119 - 4,358,910 4,359,118 - 4,358,909 4,359,117 - 4,358,908 4,359,116 - 4,358,907 4,359,108 - 4,358,899 4,359,106 - 4,358,897 4,359,104 - 4,358,895 4,359,103 - 4,358,894 4,359,083 - 4,358,874 4,359,082 - 4,358,873 4,359,048 - 4,358,839 4,359,047 - 4,358,838 4,359,046 - 4,358,837 4,359,045 - 4,358,836 4,359,044 - 4,358,835 4,359,043 - 4,358,834 4,359,042 - 4,358,833 4,359,040 - 4,358,831 4,359,039 - 4,358,830 4,359,033 - 4,358,824 4,359,032 - 4,358,823 4,359,031 - 4,358,822 4,359,030 - 4,358,821 4,359,029 - 4,358,820 4,359,028 - 4,358,819 4,359,027 - 4,358,818 4,359,025 - 4,358,816 4,359,024 - 4,358,815 4,359,023 - 4,358,814 4,359,018 - 4,358,809 4,359,011 - 4,358,802 4,359,008 - 4,358,799 4,359,007 - 4,358,798 4,359,003 - 4,358,794 4,358,986 - 4,358,777 4,358,985 - 4,358,776 4,358,982 - 4,358,773 4,358,974 - 4,358,765 4,358,971 - 4,358,762 4,358,969 - 4,358,760 4,358,968 - 4,358,759 4,358,960 - 4,358,751 4,358,959 - 4,358,750 4,358,958 - 4,358,749 4,358,954 - 4,358,745 4,358,774 - 4,358,565 4,358,534 - 4,358,325 4,358,507 - 4,358,298 4,358,475 - 4,358,266 4,358,465 - 4,358,256 4,358,455 - 4,358,246 4,358,454 - 4,358,245 4,358,453 - 4,358,244 4,358,452 - 4,358,243 4,358,446 - 4,358,237 4,358,444 - 4,358,235 4,358,442 - 4,358,233 4,358,440 - 4,358,231 4,358,439 - 4,358,230 4,358,438 - 4,358,229 4,358,437 - 4,358,228 4,358,430 - 4,358,221 4,358,429 - 4,358,220 4,358,426 - 4,358,217 4,358,361 - 4,358,152 4,358,352 - 4,358,143 4,358,254 - 4,358,045 Click to see list of phasing windowsClick to see list of phasing windows
Gene map
Phasing analysis map
Phasing Analysis (above): Each dot represents a "window" of ten cycles of small RNAs of length 21 nt (where 21 is set in the control panel under Select phasing analysis options), with the score for the degree of phasing indicated on the Y axis (scores calculated approximately as described by Howell et al., 2007). The red dot is the highest scoring window and has the best score in this region. Other colored dots are windows which are in phase with the highest scoring window -- exactly-in-phase windows appear as filled dots, and almost-in-phase (-1/+1) windows as hollow dots. Only those reads corresponding to the featured length (the default length is 21 nt) are considered.

Gene Chr Strand Gene Type 5' End 3' End Model # of Splice Variants
ath-MIR169a 3 c miRNA 4,359,219 4,358,994 1 No splice variant annotated
    Predicted function: miRNA