Rice small RNA Information



Reads existing in this region (Chr 1, 34,278,492 - 34,278,956):  1 - 114 of 114      


Page 1 of 1:    1    
#SequenceHitsCoordinateStrandLenSeparatorG1_5G6_10AGO1a_IPAGO1b_IPAGO1c_IPAGO_CTAGO4a_IPAGO4b_IPAGO16_IPdcl1_sdldcl3_sdlrdr2_sdlwt_sdlME5aPxo99aOsMockLeafRootBCPCallusTCPUNMLACt1La706La706cLros1bLOsNpbOsTCP_brdr6_HTrdr6_LTzh_HTzh_LT704f704s9311f 9311s waf1-1waf1-2Wt_waf1-1Wt_waf1-2Wt_HEN1bSeg_Wt_HEN1bOs hen1-358N_158S_1total_mel1total_WTMEL1IP_WTMEL1IP_mel1WTLamina3A1Lamina3A3Lamina
Signature abundances normalized to (varies by library depth): Separator2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M10M10M10M10M2M2M2M2M5M5M5M5M5M5M5M2M2M5M5M5M5M8M8M8M
1GCTAGGAATAGGATACACCGGGAA134,278,578w24Separator0000000000000000000000000000100000000000000000000000
2ACACCGGGAATCTTGGCG134,278,592w18Separator0000000000000000000000000000001000000000000000000000
3ACACCGGGAATCTTGGCGGAA134,278,592w21Separator00000000000000000000000000005137900000000000000000000
4CACCGGGAATCTTGGCGGAA134,278,593w20Separator0000000000000000000000000000010000000000000000000000
5CGCTCTACGATCCTCTGAT134,278,613w19Separator0000000000000000000000000000000000000000000000010000
6CGCTCTACGATCCTCTGATG134,278,613w20Separator0000000000000000000000000000000000000000000000020000
7CGCTCTACGATCCTCTGATGT134,278,613w21Separator0000000000000000000000000000001000000000000001811750000
8GCTCTACGATCCTCTGATGT134,278,614w20Separator0000000000000000000000000000010000000000000000000000
9ATCAGAGGATCGTAGAGCGT134,278,631c20Separator0000000000000000000000000000000000000000000000310000
10ATCAGAGGATCGTAGAGCGTT134,278,631c21Separator000000000000000000000000000000000000000000000241400000
11CATCAGAGGATCGTAGAGCGT134,278,632c21Separator0000000000000000000000000000000000000000000000010000
12CTATCATCGATCTTGCACC134,278,634w19Separator0000000000000000000000000000000000000000000000010000
13CTATCATCGATCTTGCACCG134,278,634w20Separator0000000000000000000000000000000000000000000000020000
14CTATCATCGATCTTGCACCGC134,278,634w21Separator0000000000000000000000000000012200000000000001482030000
15TATCATCGATCTTGCACCGC134,278,635w20Separator0000000000000000000000000000011000000000000000010000
16ATAGACATCAGAGGATCGTAGAGC134,278,637c24Separator00000000000000000000000000047000000000000000000000000
17TGATAGACATCAGAGGATCGT134,278,639c21Separator0000000000000000000000000000000010000000000000000000
18GGTGCAAGATCGATGATAGAC134,278,652c21Separator0000000000000000000000000000022020100000000004200000
19CGGTGCAAGATCGATGATAGAC134,278,653c22Separator0000000000000000000000000000010000000000000000000000
20AATGCTCGTCTGCTGCGTGA134,278,655w20Separator0000000000000000000000000000011000000000000000000000
21AATGCTCGTCTGCTGCGTGAT134,278,655w21Separator0000000000000000000000000000001000300000000000300000
22AATGCTCGTCTGCTGCGTGATGATCGGTG134,278,655w29Separator0000000000000000000000000000000000000000000000100000
23TGCGGTGCAAGATCGATGATAGAC134,278,655c24Separator0000000000000000000000000000000000100000000000000000
24GAGCATTGCGGTGCAAGATCG134,278,661c21Separator0000000000000000000000000000000000100000000000000000
25GCGTGATGATCGGTGCCGGCT134,278,669w21Separator0000000000000000000000000000010000000000000000000000
26CACGCAGCAGACGAGCATTGC134,278,673c21Separator0000000000000000000000000000030000000000000001010000
27GATCGGTGCCGGCTGCGTGC134,278,676w20Separator0000000000000000000000000000001000000000000000000000
28GATCGGTGCCGGCTGCGTGCT134,278,676w21Separator0000000000000000000000000000372700100000000000100000
29GATCGGTGCCGGCTGCGTGCTG134,278,676w22Separator0000000000000000000000000000002000000000000000000000
30GATCGGTGCCGGCTGCGTGCTGT134,278,676w23Separator0000000000000000000000000000010000000000000000000000
31GATCGGTGCCGGCTGCGTGCTGTG134,278,676w24Separator0000000000000000000000000000010000000000000000000000
32CACGCAGCCGGCACCGATC134,278,694c19Separator0000000000000000000000000000000000000000000000010000
33CACGCAGCCGGCACCGATCA134,278,694c20Separator0000000000000000000000000000202000000000000000000000
34CACGCAGCCGGCACCGATCAT134,278,694c21Separator00000000000000000000000000001832302610300000000103120000
35GTGTGTGACAGGGTGATCAGG134,278,697w21Separator0000000000000000000000000000010000000000000000100000
36TGTGTGACAGGGTGATCAGGC134,278,698w21Separator0000000000000000000000000000000000000000000001000000
37CCCCCTCCGTGTGTGACAGAC134,278,718w21Separator0000000000000000000000000000112020000000000001000000
38CCCCTCCGTGTGTGACAGAC134,278,719w20Separator0000000000000000000000000000001000000000000000000000
39CCCTCCGTGTGTGACAGACAG134,278,720w21Separator0000000000000000000000000000000000100000000000000000
40CTCCGTGTGTGACAGACAG134,278,722w19Separator0000000000000000000000000000000000100000000000000000
41CTCCGTGTGTGACAGACAGAT134,278,722w21Separator0000000000000000000000000000000000000000000001000000
42TGTCACACACGGAGGGGGCC134,278,735c20Separator0000000000000000000000000000001000000000000000000000
43CTGTCACACACGGAGGGG134,278,736c18Separator0000000000000000000000000000000200000000000000000000
44CTGTCACACACGGAGGGGG134,278,736c19Separator0000000000000000000000000000011200000000000000000000
45CTGTCACACACGGAGGGGGCC134,278,736c21Separator00000000000000000000090000008121121200000000000001110000
46TCTGTCACACACGGAGGGGGC134,278,737c21Separator0000000000000000000000000000000000000000000000010000
47GTCTGTCACACACGGAGGGGG134,278,738c21Separator00000000000000000000000000000000201000000000000000000
48AGATCAACACAGCGCCCATGA134,278,739w21Separator000000000000000000000000000051971300000000000000000000
49ATGGGCGCTGTGTTGATCTGT134,278,757c21Separator0000000000000000000000000000010200000000000000300000
50CATGGGCGCTGTGTTGATCTG134,278,758c21Separator0000000000000000000000000000000000000000000000210000
51GAAGTACCGAGTACGTACGTG134,278,760w21Separator0000000000000000000000000000021200000000000000000000
52TCTCATGGGCGCTGTGTTGAT134,278,761c21Separator0000000000000000000000000000000100000000000000000000
53AGTACCGAGTACGTACGTGTG134,278,762w21Separator0000000000000000000000000000000000100000000000000000
54ACCGAGTACGTACGTGTGCAC134,278,765w21Separator0000000000000000000000000000000000100000000000000000
55AGTACGTACGTGTGCACCCTC134,278,769w21Separator0000000000000000000000000000010000000000000000000000
56CTCGGTACTTCTCATGGGCGC134,278,770c21Separator0000000000000000000000000000000000000000000000010000
57CGTACGTACTCGGTACTTCTC134,278,778c21Separator0000000000000000000000000000100000000000000001020000
58CACGTACGTACTCGGTACTTC134,278,780c21Separator0000000000000000000000000000000010500000000000000000
59TGCACCCTCCGTACGTGCGTG134,278,781w21Separator0000000000000000000000000000232900000000000000000000
60TGCACACGTACGTACTCGGTA134,278,784c21Separator0000000000000000000000000000000100000000000000000000
61TGCACACGTACGTACTCGGTAC134,278,784c22Separator0000000000000000000000000000000010000000000000000000
62GTGCACACGTACGTACTCGGT134,278,785c21Separator0000000000000000000000000000000010000000000000000000
63CGTGCGTGCTTCTGTTGAGAT134,278,794w21Separator0000000000000000000000000000000000000000000000010000
64CACGCACGTACGGAGGGTGCA134,278,801c21Separator00000000000000000000000000000000302800000000000000000
65CTTCTGTTGAGATCCACCCAG134,278,802w21Separator0000000000000000000000000000141010000000000009113420000
66TTCTGTTGAGATCCACCCAG134,278,803w20Separator0000000000000000000000000000000100000000000000020000
67ACAGAAGCACGCACGTACGGA134,278,808c21Separator0000000000000000000000000000100000000000000000000000
68CACCCAGAGGAATTACTTGTC134,278,816w21Separator0000000000000000000000000000010000000000000000000000
69GGTGGATCTCAACAGAAGCACGCA134,278,819c24Separator0000000000000000000000000000000100000000000000000000
70GGGTGGATCTCAACAGAAG134,278,820c19Separator0000000000000000000000000000020000000000000000000000
71GGGTGGATCTCAACAGAAGC134,278,820c20Separator0000000000000000000000000000000300000000000001000000
72GGGTGGATCTCAACAGAAGCA134,278,820c21Separator00000000000000000000000000002311345400000000000000431010000
73TGGGTGGATCTCAACAGAAGC134,278,821c21Separator0000000000000000000000000000000000000000000003000000
74CTGGGTGGATCTCAACAGAAG134,278,822c21Separator0000000000000000000000000000000000200000000000000000
75AGGAATTACTTGTCAAACT134,278,823w19Separator0000000000000000000000000000000000000000000001000000
76AGGAATTACTTGTCAAACTTT134,278,823w21Separator0000000000000000000000000000022200000000000003300000
77AGGAATTACTTGTCAAACTTTTGAGTGCT134,278,823w29Separator0000000000000000000000000000000000000000000001000000
78TCTGGGTGGATCTCAACAGAA134,278,823c21Separator0000000000000000000000000000000020200000000000000000
79TCTGGGTGGATCTCAACAGAAG134,278,823c22Separator0000000000000000000000000000010000000000000000000000
80ATTACTTGTCAAACTTTTGAGTGC134,278,827w24Separator0000000000000000000000000000000000000000000000000100
81TACTTGTCAAACTTTTGAGTGC134,278,829w22Separator0000000000000000000000000000000000000000000000100000
82AGTAATTCCTCTGGGTGGATCTCA134,278,832c24Separator0000000000000000000000000000000000100000000000000000
83TCAAACTTTTGAGTGCTTGGTT134,278,835w22Separator0000000000000000000000000000001000000000000000000000
84AGTTTGACAAGTAATTCCTCT134,278,841c21Separator0000000000000000000000000000111100000000000001200000
85AGTTTGACAAGTAATTCCTCTG134,278,841c22Separator0000000000000000000000000000000000000000000001000000
86TTGAGTGCTTGGTTAGTTGGT134,278,843w21Separator0000000000000000000000000000001000000000000000000000
87TGAGTGCTTGGTTAGTTGGTT134,278,844w21Separator0000000000000000000000000000032300000000000006300000
88GTGCTTGGTTAGTTGGTTTCG134,278,847w21Separator0000000000000000000000000000000000000000000000000010
89CCAACTAACCAAGCACTCAAA134,278,862c21Separator0000000000000000000000000000000000000000000000040000
90AAACCAACTAACCAAGCACTCAAA134,278,865c24Separator0000000000000000000000000000000000000000000000100000
91TCGTATTTCTTGTGTTTCAAA134,278,865w21Separator0000000000000000000000000000011000000000000000000000
92TGAAACACAAGAAATACGAA134,278,883c20Separator0000000000000000000000000000000000000000000000100000
93TGAAACACAAGAAATACGAAA134,278,883c21Separator0000000000000000000000000000100000000000000000600000
94TTTGAAACACAAGAAATACGA134,278,885c21Separator0000000000000000000000000000000000200000000000000000
95AATTAATATTTACCTTCTTATCAT134,278,913w24Separator0000000000000000000000000000000000000000000000000100
96AATATTTACCTTCTTATCATCGAC134,278,917w24Separator0000000000000000000000000000000100000000000000000000
97ATTTACCTTCTTATCATCGACCTG134,278,920w24Separator0000000000000000000000000000000000000000000010000000
98ACCTTCTTATCATCGACCTGCAAA134,278,924w24Separator0000000000000000000000000000000000000000000000000001
99CTTATCATCGACCTGCAAATTGAG134,278,929w24Separator0000000000000000000000000010000000000000000000000000
100TATCATCGACCTGCAAATTGAGA134,278,931w23Separator0000000000000000000000000000000000000000000000000100
101TCATCGACCTGCAAATTGAGAAAT134,278,933w24Separator0000000100000000000000000000000000000000000000000000
102ATCGACCTGCAAATTGAGAAATTT134,278,935w24Separator0000000010000000000000000000000000000000000000000000
103GGTCGATGATAAGAAGGTAAATAT134,278,941c24Separator0000000000000000000000000000002000000000000000000000
104CAGGTCGATGATAAGAAGGTA134,278,943c21Separator0000000000000000000000000000000100000000000000000000
105TGCAGGTCGATGATAAGAAGGTA134,278,945c23Separator0000000000000000000000000000100000000000000000000000
106TGCAGGTCGATGATAAGAAGGTAA134,278,945c24Separator0000000000000000000000000000001000000000000010000000
107TTGCAGGTCGATGATAAG134,278,946c18Separator0000000000000000000000000000101000000000000000000000
108TTGCAGGTCGATGATAAGAA134,278,946c20Separator0000000000000000000000000000001000000000000000000000
109TTGCAGGTCGATGATAAGAAG134,278,946c21Separator0000000000000000000000000000001000000000000001210000
110TTGCAGGTCGATGATAAGAAGGTA134,278,946c24Separator0000000000000000000000000000000000000000000010000000
111TTTGCAGGTCGATGATAAGAAGGT134,278,947c24Separator0000000100000000000000000000000000000000000000000000
112AATTTGCAGGTCGATGATAAGAAG134,278,949c24Separator0000000010000000000000000000000000000000000000000000
113GAAATTTTATTCCTTCAATGCCAC134,278,952w24Separator0000000000000000000000000000000000000000000100000000
114TCTCAATTTGCAGGTCGATGAT134,278,953c22Separator0000000000000000000000000000000000000000000000000001



Number of unique reads retrieved on this page: 114