Rice small RNA Information



Reads existing in this region (Chr 1, 6,677,440 - 6,677,860):  1 - 101 of 101      


Page 1 of 1:    1    
#SequenceHitsCoordinateStrandLenSeparatorG1_5G6_10AGO1a_IPAGO1b_IPAGO1c_IPAGO_CTAGO4a_IPAGO4b_IPAGO16_IPdcl1_sdldcl3_sdlrdr2_sdlwt_sdlME5aPxo99aOsMockLeafRootBCPCallusTCPUNMLACt1La706La706cLros1bLOsNpbOsTCP_brdr6_HTrdr6_LTzh_HTzh_LT704f704s9311f 9311s waf1-1waf1-2Wt_waf1-1Wt_waf1-2Wt_HEN1bSeg_Wt_HEN1bOs hen1-358N_158S_1total_mel1total_WTMEL1IP_WTMEL1IP_mel1WTLamina3A1Lamina3A3Lamina
Signature abundances normalized to (varies by library depth): Separator2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M10M10M10M10M2M2M2M2M5M5M5M5M5M5M5M2M2M5M5M5M5M8M8M8M
1TTGGGCATGAAATGATAGCAC16,677,449c21Separator0000000000000000000000000000000000000000000010000000
2TTTGGGCATGAAATGATAGCA16,677,450c21Separator0000000000000000000000000000000000000000000100000000
3TGATGATATGCAGCATCTTGT16,677,491c21Separator0000000000000000000000000000000000000000000010000000
4TTTTGATCTGATCTGCTTGTT16,677,535c21Separator0000000000000000000000000000000000000000000000000001
5CCTCCTCGATCTCTTCGATCTAATTAAGC16,677,578c29Separator0000000000000000000000000000000000000000000000010000
6AAGGGTGCTCCCTCCTCCTCGAT16,677,591c23Separator0000000000000000000000000000000000000000000000000010
7GACTGAAGGGTGCTCCCT26,677,596c18Separator0000000000000000000000000000000000000000000000000100
8GGACTGAAGGGTGCTCCC26,677,597c18Separator0000000000000000000000000000000000000000000100000000
9GGACTGAAGGGTGCTCCCT26,677,597c19Separator0000000000000000000100000000020000000000000110200000
10TGGACTGAAGGGTGCTCC26,677,598c18Separator0000000000000000000000000000100000000110000000000000
11TGGACTGAAGGGTGCTCCC26,677,598c19Separator0000000000000000000000000002000000010000010000100000
12TGGACTGAAGGGTGCTCCCT26,677,598c20Separator0000000000000000000100000000110002001110000111910111
13TTGGACTGAAGGGTGCT26,677,599c17Separator0000000000000000000000000000000000001111110000000000
14TTGGACTGAAGGGTGCTC26,677,599c18Separator0000000000000010000100000010522100010000000111260100
15TTGGACTGAAGGGTGCTCC26,677,599c19Separator00020000000110200001000000108226040101110001193100323
16TTGGACTGAAGGGTGCTCCC26,677,599c20Separator007215080000222100010400000032010135129421121111034217269880211414
17TTGGACTGAAGGGTGCTCCCT26,677,599c21Separator141313003900013429143320203200200329258342113882117501211533712586688662,5151921,57013890113
18TTGGACTGAAGGGTGCTCCCTC16,677,599c22Separator0000000000000000000100000010002000100000000114100000
19CTTGGACTGAAGGGTGCT16,677,600c18Separator0000000000000000000000000000200100001000000000000000
20CTTGGACTGAAGGGTGCTC16,677,600c19Separator0000000000000000000000000000001000000000000000000000
21CTTGGACTGAAGGGTGCTCC16,677,600c20Separator0000000000000000000000000000000002000200000000000111
22CTTGGACTGAAGGGTGCTCCC16,677,600c21Separator00000000000010000000000000100000018042311015106400111
23CTTGGACTGAAGGGTGCTCCCT16,677,600c22Separator4000050001106822600000000202020102220138101194431111600231117
24GCTTGGACTGAAGGGTGCTCCCT16,677,601c23Separator0000000100000000000000000000000000000000000000000000
25TGCTTGGACTGAAGGGTGCTC16,677,602c21Separator0000000000000000000000000000000000000000000100000000
26TTGCTTGGACTGAAGGGTGCT16,677,603c21Separator0000000000000000000000000000000000000000000010000000
27TCTTTGCTTGGACTGAAGGGTGC16,677,606c23Separator0000000000000000000000000000000000000000000010000000
28TCGCGCCGTCTTTGCTTGGACT16,677,614c22Separator0000000000000000000000000000000000000100000000000010
29TCGCGCCGTCTTTGCTTGGACTG16,677,614c23Separator0000000000000000000000000000000000000100000000000000
30TCGCGCCGTCTTTGCTTGGACTGA16,677,614c24Separator0000000000000000000000000000000000000001010010000000
31TTCCGATCTCGCGCCGTCTTTG16,677,622c22Separator0000000000000000000000000000000000000000000100000000
32CGTTCCGATCTCGCGCCGTCTT16,677,624c22Separator0000000000000000000000000000000002000000000000000000
33CGTTCCGATCTCGCGCCGTCTTT16,677,624c23Separator0000000000000000000000000000000100000000000110000000
34CGTTCCGATCTCGCGCCGTCTTTG16,677,624c24Separator0000000000000000000000000000000002000000000011100000
35GGTAACGTTCCGATCTCGCGC16,677,629c21Separator0000000000000000000000000000000100000000000000000000
36GGTAACGTTCCGATCTCGCGCC16,677,629c22Separator0000000000000000000000000000000000010000000000000000
37GGTAACGTTCCGATCTCGCGCCG16,677,629c23Separator0000000000000000000000000000001000010000000110000000
38GGAGGTAACGTTCCGATCTCG16,677,632c21Separator0000000000000000000000000000000000000000000010000000
39ATGAAGCGGGAGGTAACGTTC16,677,640c21Separator0000000000000000000000000000000100000000000000000000
40GTGAATGAAGCGGGAGGT16,677,644c18Separator0000000000000000000000000000000000000000000000100000
41GTGAATGAAGCGGGAGGTAA16,677,644c20Separator4000000000000000000000000000000000000000000010000000
42AGTGAATGAAGCGGGAGG16,677,645c18Separator0000000000001000010000000000001304000000000000000000
43AGTGAATGAAGCGGGAGGT16,677,645c19Separator0000000000000000010000000000301200040000000000110010
44AGTGAATGAAGCGGGAGGTA16,677,645c20Separator00000000001000000000000000020010070240001000111100100
45AGTGAATGAAGCGGGAGGTAA16,677,645c21Separator54850000010000101002403033340104630294422631210000000251218920113
46AGTGAATGAAGCGGGAGGTAACGT16,677,645c24Separator0000000000000000000000000000100000000000000000000000
47TGAGTGAATGAAGCGGGAGGT16,677,647c21Separator0000000000000000000000000000000000000000000000010000
48GATGAGTGAATGAAGCGGGA16,677,649c20Separator0000000000100000000000000000000000000000000000000000
49GATGAGTGAATGAAGCGGGAGG16,677,649c22Separator0000000100000000000000000000000000000000000000000000
50AGATGAGTGAATGAAGCGGGA16,677,650c21Separator0000000000000000000000000000000000010000000000000000
51CTGCCGACTCATTCACCCA16,677,708c19Separator0000000000000000000000000000000000000000000000000100
52GCTGCCGACTCATTCACC16,677,709c18Separator0000000000000000000000000000100000000000000000000000
53AGCTGCCGACTCATTCAC16,677,710c18Separator0000000000000000000000000000111100000000000000000000
54AGCTGCCGACTCATTCACC16,677,710c19Separator0000000100000000000000000000101104000001010010000000
55AGCTGCCGACTCATTCACCC16,677,710c20Separator0000000000000010050000000000112317001111010110010000
56AGCTGCCGACTCATTCACCCA16,677,710c21Separator48000015300101141220201000010364635522440231222350951010311
57TAGCTGCCGACTCATTCACCCA16,677,711c22Separator0000000000000000000000000000000000000000000000000010
58AGGGTCGAATTAGCTGCCGACTCA16,677,721c24Separator0000000000000000000000000000000000000000010000000000
59GCTAGGGTCGAATTAGCTGCC16,677,724c21Separator0000000000000000000000000000000000000000000100000000
60GTGCTAGGGTCGAATTAGC16,677,726c19Separator0000000000000000000000000000000002000000000000000000
61GTGCTAGGGTCGAATTAGCT16,677,726c20Separator0000000000000000000000000000010000000000000000000000
62CATGAGTGGACTGAAGGACGCT16,677,731w22Separator0000000000000000000000000000000000000000000000000010
63TGGGCGGTGCTAGGGTCGA16,677,732c19Separator0000000000000000000000000000000000000000000010000000
64TGGGCGGTGCTAGGGTCGAA16,677,732c20Separator0000000000000000000000000000000000010000000000000000
65TGGGCGGTGCTAGGGTCGAAT16,677,732c21Separator0000000000000000000000000000000000010000000000000000
66TGGGCGGTGCTAGGGTCGAATT16,677,732c22Separator0000000000000000000000000000000000000000000110100000
67TCCACTCATGGGCGGTGCTAG16,677,740c21Separator0000000000000000000000000000000000000000000100000000
68AGTCCACTCATGGGCGGTGCTAGG16,677,742c24Separator0000000000000000000000000000000000000000000100200000
69TTCAGTCCACTCATGGGCGGT16,677,745c21Separator0000000000000000000000000000000000000010000000000000
70AGAGCGTCCTTCAGTCCA16,677,754c18Separator0000000000000000000000000000001000000000000000000000
71AGAGCGTCCTTCAGTCCAC16,677,754c19Separator0000000000000000000000000000002102000010000100000000
72AGAGCGTCCTTCAGTCCACT16,677,754c20Separator000001120010000000000000000012121710170140100000110000110
73AGAGCGTCCTTCAGTCCACTC16,677,754c21Separator41300010100001111700000010000061353870138614550133810220000111
74AGAGCGTCCTTCAGTCCACTCA16,677,754c22Separator71300010600101310490000000021008344458743111161413925140310300132
75AGAGCGTCCTTCAGTCCACTCAT16,677,754c23Separator0000000000000000000000000000000000000001110000000000
76AGAGAGCGTCCTTCAGTCCACTC16,677,756c23Separator0000000000000000000000000000000000100000000000000000
77AGAGAGCGTCCTTCAGTCCACTCA16,677,756c24Separator0000000000000000000000000000010000000000000000000000
78TTCCATCCATCGATCGCTTCT16,677,756w21Separator0000000000000000000000000000000000000000000000000001
79AAGAGAGCGTCCTTCAGTCCACTCAT16,677,757c26Separator0000000000000000000000000000000000000100000000000000
80ATGGATGGAAGAGAGCGTC16,677,765c19Separator0000000000000000000000000000000100000000000000000000
81GATGGATGGAAGAGAGCGT16,677,766c19Separator0000000000000000000000000000101000000000000100000000
82TCGATGGATGGAAGAGAG26,677,768c18Separator0000000000000000000000000000100000000000000000000000
83TCGATGGATGGAAGAGAGCGT16,677,768c21Separator0000000000000000000000000000000000000000000110000000
84TCGATGGATGGAAGAGAGCGTC16,677,768c22Separator0000000000000000010000000000010000000000000100000000
85TCGATGGATGGAAGAGAGCGTCC16,677,768c23Separator0000000000000000000000000000100000000000000110100000
86ATCGATGGATGGAAGAGAGCGTC16,677,769c23Separator0000000000000000000000000000100000000000000000000000
87ATCGATGGATGGAAGAGAGCGTCC16,677,769c24Separator0000000000000000000000000000000002000000000000000000
88GATCGATGGATGGAAGAGAGCGT16,677,770c23Separator0000000000000000000000000000111100000000000100000000
89GATCGATGGATGGAAGAGAGCGTC16,677,770c24Separator0000000000000000000000000000010000000000000000000000
90CGATCGATGGATGGAAGAGAGCGT16,677,771c24Separator0000000000000000000000000000000002010000000100010000
91GAAGCGATCGATGGATGGAA16,677,775c20Separator0000000000000000000000000000000000000000000100000000
92AGAAGCGATCGATGGATGGAAG16,677,776c22Separator0000000000000000000000000000010000000000000100160000
93AAGAAGCGATCGATGGATGGAAG16,677,777c23Separator0000000000000000010000000000000000000000000000000000
94GGAAGAAGCGATCGATGGATGG16,677,779c22Separator0000000000000000000000000000000000000000000010000000
95TGGAAGAAGCGATCGATGGATG16,677,780c22Separator0000000000000000000000000000101000000000000000000000
96TGGAAGAAGCGATCGATGGATGG16,677,780c23Separator0000000000000000000000000000000100000000000000000000
97TGGAAGAAGCGATCGATGGATGGA16,677,780c24Separator0000000000000000000000000000000000000000000110000000
98TGGAAGAAGCGATCGATGGATGGAA16,677,780c25Separator0000000000000000000000000000010000000000000110000000
99TGGAAGAAGCGATCGATGGATGGAAG16,677,780c26Separator0000000000000000000000000010000000000000000119540000
100TTTGATGGAAGAAGCGATCGATGGATG16,677,785c27Separator0000000000000000000000000000000000000000000000010000
101ATATTCTTTTAATTTGATGGA16,677,797c21Separator0000000000000000000000000000000000000000000000000001



Number of unique reads retrieved on this page: 89