Rice small RNA Information

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Reads existing in this region (Chr 1, 20,457,622 - 20,458,063): 1 - 57 of 57

Page 1 of 1: 1

#	Sequence	Hits	Coordinate	Strand	Len	Separator	WT2003s	WT2007s	WT2011s	T2iZ11R	T2iZ11S	T4iZ11S	T4iZ11R	T6iZ11R	T6P9R	T6Sp1R	AGO18IP_RSV1	AGO18IP_RSV2	AGO1bIP_RSV2	AGO1aIP_RSV1	AGO1aIP_RSV2	AGO1bIP_RSV1	wt_kit_adult	miR2_adult	miR7b_adult	miR8_adult	miR390_KO1	miR390_KO2	wt390r1	wt390r2
Signature abundances normalized to (varies by library depth):						Separator	10M	10M	10M	10M	10M	10M	10M	10M	10M	10M	500K	500K	500K	500K	500K	500K	20M	20M	20M	20M	20M	20M	20M	20M
1	ATCTCCTTGCCGAAACCTCCCGAG	1	20,457,622	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	1
2	CATCTCCTTGCCGAAACCTCCCGAG	1	20,457,623	c	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
3	GGCATCTCCTTGCCGAAACCTCC	1	20,457,625	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
4	GACGTTGTCTAGGCATCTCCTTGC	1	20,457,636	c	24	Separator	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	AAAAGGAGAGAAGCGACAGAACAC	1	20,457,640	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	3	0
6	AAAAGGAGAGAAGCGACAGAACACC	1	20,457,640	w	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
7	AAAGGAGAGAAGCGACAGAACACC	1	20,457,641	w	24	Separator	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	1	0	0	0	2	5	2	1
8	AAAGGAGAGAAGCGACAGAACACCG	1	20,457,641	w	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0
9	TTGGAGACGTTGTCTAGGCATC	2	20,457,641	c	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
10	AAGGAGAGAAGCGACAGAACACCG	1	20,457,642	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	1	2
11	AGGAGAGAAGCGACAGAACACCGC	1	20,457,643	w	24	Separator	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	3	3	0
12	AGGAGAGAAGCGACAGAACACCGCC	1	20,457,643	w	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
13	TTTTGGAGACGTTGTCTAGGCATC	1	20,457,643	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
14	GGAGAGAAGCGACAGAACACCGCC	1	20,457,644	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
15	AGAGAAGCGACAGAACACCGCCGC	1	20,457,646	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
16	GAGAAGCGACAGAACACCGCCGCC	1	20,457,647	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	0
17	GAAGCGACAGAACACCGCCGCCACT	1	20,457,649	w	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0
18	ACAGAACACCGCCGCCACT	1	20,457,655	w	19	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
19	GTTCTGTCGCTTCTCTCCTTTTGG	1	20,457,661	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
20	CGGTGTTCTGTCGCTTCTCTCCT	1	20,457,665	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
21	GTTCTTTAAGGTCTCAAAGAGAGCC	1	20,457,674	w	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
22	GACCTTAAAGAACAGTGGCGGCGG	1	20,457,686	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
23	TCAAAGAGAGCCGAGACTGAG	1	20,457,687	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
24	TCAAAGAGAGCCGAGACTGAGCT	1	20,457,687	w	23	Separator	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
25	GAGACCTTAAAGAACAGTGGCGGC	1	20,457,688	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	2	0	3	0	1
26	AAAGAGAGCCGAGACTGAGCT	1	20,457,689	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
27	TTTGAGACCTTAAAGAACAGTGG	1	20,457,691	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
28	TTTGAGACCTTAAAGAACAGTGGC	1	20,457,691	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
29	CTTTGAGACCTTAAAGAACAGTGG	1	20,457,692	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
30	AGAGCCGAGACTGAGCTTTCGTTT	1	20,457,693	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
31	AGCCGAGACTGAGCTTTCGTTTGG	1	20,457,695	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1
32	GCCGAGACTGAGCTTTCGTTTGGC	1	20,457,696	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2
33	CCGAGACTGAGCTTTCGTTTGGCA	1	20,457,697	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
34	CGAGACTGAGCTTTCGTTTGGCA	1	20,457,698	w	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
35	CGAGACTGAGCTTTCGTTTGGCAC	1	20,457,698	w	24	Separator	1	0	0	0	5	0	1	0	0	0	0	0	0	0	0	0	0	2	8	5	0	0	5	0
36	CGAGACTGAGCTTTCGTTTGGCACC	1	20,457,698	w	25	Separator	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0
37	GAGACTGAGCTTTCGTTTGGCACC	1	20,457,699	w	24	Separator	6	3	0	0	4	1	4	14	4	0	0	0	0	0	0	0	10	9	18	26	2	1	6	5
38	AGACTGAGCTTTCGTTTGGCAC	1	20,457,700	w	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
39	AGACTGAGCTTTCGTTTGGCACC	1	20,457,700	w	23	Separator	0	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
40	AGACTGAGCTTTCGTTTGGCACCC	1	20,457,700	w	24	Separator	2	6	7	17	2	0	3	3	5	8	0	0	0	0	0	0	3	7	17	10	2	4	4	4
41	AGACTGAGCTTTCGTTTGGCACCCA	1	20,457,700	w	25	Separator	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
42	GACTGAGCTTTCGTTTGGCACCCA	1	20,457,701	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
43	ACTGAGCTTTCGTTTGGCACCCA	1	20,457,702	w	23	Separator	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
44	ACTGAGCTTTCGTTTGGCACCCAC	1	20,457,702	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
45	CTGAGCTTTCGTTTGGCACCC	1	20,457,703	w	21	Separator	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
46	CTTTCGTTTGGCACCCACCCTTGA	1	20,457,708	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
47	AGGGTGGGTGCCAAACGAAAGCTC	1	20,457,728	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
48	GGCGAGGCCGTTAGGTGTATGTTG	1	20,457,734	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
49	ATTGAATGGCACAACATACACCTA	1	20,457,768	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
50	ATTAACCGCCGGTGCTCATGG	1	20,457,806	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	1	0	0	0	0
51	TGAGCACCGGCGGTTAATTTG	1	20,457,823	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
52	GTGTACTGTGTGGTATCCCTTACCCA	1	20,457,849	c	26	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
53	CCACACCTGATCAAGGCTGCA	1	20,457,908	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
54	TTCAGATACGCCGTGTAGGA	1	20,457,971	c	20	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
55	TTCAGATACGCCGTGTAGGAC	1	20,457,971	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0
56	TTTCATCGGTTCCTGATGCCT	1	20,457,974	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
57	TTCCTGATGCCTCCGAAGCCT	2	20,457,983	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	1	1	11	0	0	0	0

Number of unique reads retrieved on this page: 55