Rice small RNA Information

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Reads existing in this region (Chr 1, 2,334,733 - 2,335,385): 1 - 102 of 102

Page 1 of 1: 1

#	Sequence	Hits	Coordinate	Strand	Len	Separator	WT2003s	WT2007s	WT2011s	T2iZ11R	T2iZ11S	T4iZ11S	T4iZ11R	T6iZ11R	T6P9R	T6Sp1R	AGO18IP_RSV1	AGO18IP_RSV2	AGO1bIP_RSV2	AGO1aIP_RSV1	AGO1aIP_RSV2	AGO1bIP_RSV1	wt_kit_adult	miR2_adult	miR7b_adult	miR8_adult	miR390_KO1	miR390_KO2	wt390r1	wt390r2
Signature abundances normalized to (varies by library depth):						Separator	10M	10M	10M	10M	10M	10M	10M	10M	10M	10M	500K	500K	500K	500K	500K	500K	20M	20M	20M	20M	20M	20M	20M	20M
1	CTAAGACCAAGACTACCCGGA	1	2,334,751	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
2	TTGGGTAGATAGAGAGAAG	1	2,334,854	w	19	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
3	TTGGGTAGATAGAGAGAAGCC	1	2,334,854	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	119	48	408	758	0	0	0	0
4	TTGGGTAGATAGAGAGAAGCCT	1	2,334,854	w	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
5	TAGATAGAGAGAAGCCTGGCA	1	2,334,859	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
6	AGGAAATATGAACATACTCTCT	1	2,334,895	w	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
7	AGTATTGGGAACATAGGAT	1	2,334,917	w	19	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
8	TGATCCTATGTTCCCAATACT	1	2,334,937	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
9	CAGATTTGTTGTGCTGGCT	1	2,334,956	c	19	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0
10	CAGATTTGTTGTGCTGGCTT	1	2,334,956	c	20	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0
11	GTAGGTAACATGGAAGAACTA	1	2,334,979	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
12	GTAGGTAACATGGAAGAACTATCT	1	2,334,979	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
13	TAGGTAACATGGAAGAACT	1	2,334,980	w	19	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	5	0	0	0	0
14	TAGGTAACATGGAAGAACTA	1	2,334,980	w	20	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	5	0	0	0	0
15	TAGGTAACATGGAAGAACTAT	1	2,334,980	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	4	0	0	0	0
16	CTACTGCGAACAGGCGAACG	1	2,335,001	w	20	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
17	CTACTGCGAACAGGCGAACGG	1	2,335,001	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	7	10	0	0	0	0
18	GTTCGCCTGTTCGCAGTAGAT	1	2,335,019	c	21	Separator	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
19	CATCGCCGTTCGCCTGTTCGCAGT	1	2,335,026	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
20	TACATCTTCGTCAACGATCTTCAGC	1	2,335,029	w	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0
21	ATCTTCGTCAACGATCTTCAGC	1	2,335,032	w	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0
22	TGTACCCATCGCCGTTCGCCTGTT	1	2,335,032	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
23	ATGTACCCATCGCCGTTCGCC	1	2,335,033	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
24	TCTTCGTCAACGATCTTCAGCC	1	2,335,033	w	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
25	TGAAGATCGTTGACGAAGATGTACC	1	2,335,051	c	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
26	TGGCTGAAGATCGTTGACGAA	1	2,335,055	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
27	TGGCTGAAGATCGTTGACGAAGAT	1	2,335,055	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
28	CCTGGCTGAAGATCGTTGACGAAG	1	2,335,057	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
29	CTTCCCTGGCTGAAGATCGTT	1	2,335,061	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
30	AATATCACGCTGAAGGGTTA	1	2,335,064	w	20	Separator	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
31	AATATCACGCTGAAGGGTTAA	1	2,335,064	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
32	TTAATTTGATCCATGTCACT	3	2,335,081	w	20	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
33	AATTTGATCCATGTCACT	3	2,335,083	w	18	Separator	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
34	TTTGATCCATGTCACTCTAAA	1	2,335,085	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0
35	GACATGGATCAAATTAACCC	4	2,335,097	c	20	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
36	TGACATGGATCAAATTAACCCT	2	2,335,098	c	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
37	GTGACATGGATCAAATTAACCCT	2	2,335,099	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
38	AGTGACATGGATCAAATTAAC	3	2,335,100	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
39	AGTGACATGGATCAAATTAACCC	2	2,335,100	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
40	AGTGACATGGATCAAATTAACCCT	2	2,335,100	c	24	Separator	0	0	0	1	1	1	4	0	0	3	0	0	0	0	0	0	0	1	7	3	7	1	2	3
41	AGAGTGACATGGATCAAATTAACC	1	2,335,102	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
42	TAGAGTGACATGGATCAAA	1	2,335,103	c	19	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
43	TAGAGTGACATGGATCAAAT	1	2,335,103	c	20	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
44	TAGAGTGACATGGATCAAATT	1	2,335,103	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	18	0	0	0	0
45	TTTAGAGTGACATGGATCAAA	1	2,335,105	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
46	TTTAGAGTGACATGGATCAAATT	1	2,335,105	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
47	AAATTTAGAGTGACATGGATCAAA	1	2,335,108	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
48	TTCAAATCGGCAAATTTAGAGT	1	2,335,119	c	22	Separator	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
49	TTATTTGTGATATCGGCTGAGTGC	1	2,335,132	w	24	Separator	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
50	TATTTGTGATATCGGCTGAGTGCC	1	2,335,133	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
51	ATTTGTGATATCGGCTGAGTGCCA	1	2,335,134	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
52	TTTGTGATATCGGCTGAGTGC	1	2,335,135	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
53	TATCGGCTGAGTGCCATTGGGTA	1	2,335,142	w	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
54	TATCGGCTGAGTGCCATTGGGTAC	1	2,335,142	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0
55	TATCGGCTGAGTGCCATTGGGTACG	1	2,335,142	w	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
56	ATCGGCTGAGTGCCATTGGGTACG	1	2,335,143	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
57	TCGGCTGAGTGCCATTGGGTA	1	2,335,144	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
58	AGCCGATATCACAAATAATAGTGA	1	2,335,149	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
59	GCCATTGGGTACGAGTCCGGGT	1	2,335,154	w	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
60	ATTGGGTACGAGTCCGGGTCAGGT	1	2,335,157	w	24	Separator	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
61	GTACGAGTCCGGGTCAGGTA	1	2,335,162	w	20	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
62	ACGAGTCCGGGTCAGGTAACGGCTA	1	2,335,164	w	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
63	TCGTACCCAATGGCACTCAGCCGAT	1	2,335,167	c	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
64	CTCGTACCCAATGGCACTCAG	1	2,335,168	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
65	TCCGGGTCAGGTAACGGCTA	1	2,335,169	w	20	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0
66	GACTCGTACCCAATGGCACTC	1	2,335,170	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
67	GGACTCGTACCCAATGGCACTCAG	1	2,335,171	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	2
68	CGGACTCGTACCCAATGGCAC	1	2,335,172	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0
69	CGGACTCGTACCCAATGGCACT	1	2,335,172	c	22	Separator	0	1	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	1	0	1	3	4	3
70	CGGACTCGTACCCAATGGCACTC	1	2,335,172	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0
71	CGGACTCGTACCCAATGGCACTCA	1	2,335,172	c	24	Separator	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	1	4	1	4	3	2	0
72	CCGGACTCGTACCCAATGGCAC	1	2,335,173	c	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0
73	CCGGACTCGTACCCAATGGCACT	1	2,335,173	c	23	Separator	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1
74	CCGGACTCGTACCCAATGGCACTC	1	2,335,173	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	2	10	10	7
75	CCCGGACTCGTACCCAATGGCACT	1	2,335,174	c	24	Separator	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	4	2
76	ACCCGGACTCGTACCCAATGGCA	1	2,335,175	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1
77	ACCCGGACTCGTACCCAATGGCAC	1	2,335,175	c	24	Separator	0	0	0	0	0	4	2	0	0	4	0	0	0	0	0	0	0	2	14	12	1	1	3	2
78	ACCCGGACTCGTACCCAATGGCACT	1	2,335,175	c	25	Separator	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
79	GACCCGGACTCGTACCCAATGG	1	2,335,176	c	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0
80	GACCCGGACTCGTACCCAATGGCA	1	2,335,176	c	24	Separator	0	0	0	7	0	0	0	0	0	0	0	0	0	0	1	0	3	1	6	2	4	8	2	5
81	TGACCCGGACTCGTACCCAAT	1	2,335,177	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	0	0	0	0
82	TGACCCGGACTCGTACCCAATGGC	1	2,335,177	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	1	0	1	2
83	ACCTGACCCGGACTCGTACCCAAT	1	2,335,180	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	1	1	1	1
84	TACCTGACCCGGACTCGTACC	1	2,335,181	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0
85	TACCTGACCCGGACTCGTACCC	1	2,335,181	c	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
86	TTACCTGACCCGGACTCGTAC	1	2,335,182	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0
87	TTACCTGACCCGGACTCGTACC	1	2,335,182	c	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
88	TTACCTGACCCGGACTCGTACCC	1	2,335,182	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1
89	GTTACCTGACCCGGACTCGTACCC	1	2,335,183	c	24	Separator	1	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	1
90	GCCGTTACCTGACCCGGACTCGTA	1	2,335,186	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
91	ACCTAGCCGTTACCTGACCCGGAC	1	2,335,191	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
92	ATCAAGTTACAAGAGACAGAG	1	2,335,233	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
93	TTACAAGAGACAGAGCAGCGAC	1	2,335,239	w	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1
94	TACAAGAGACAGAGCAGCGACGAC	1	2,335,240	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0
95	TAACTTGATCAGGAGCGGGCA	1	2,335,241	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
96	GTAACTTGATCAGGAGCGGGCATC	1	2,335,242	c	24	Separator	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
97	TGTCTCTTGTAACTTGATCAGGA	1	2,335,250	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
98	TCATACCGGAGGGAACAAAAA	1	2,335,274	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0
99	TACCGGAGGGAACAAAAACGGAAT	1	2,335,277	w	24	Separator	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
100	AACGGAATTTTGTAAAATTGAAAC	1	2,335,293	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1
101	ACGGAATTTTGTAAAATTGAAACC	1	2,335,294	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0
102	CCCCGTCAGCAAACTCTTTGATGC	1	2,335,374	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1

Number of unique reads retrieved on this page: 94