Rice small RNA Information

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Reads existing in this region (Chr 1, 2,342,891 - 2,343,480): 1 - 107 of 107

Page 1 of 1: 1

#	Sequence	Hits	Coordinate	Strand	Len	Separator	WT2003s	WT2007s	WT2011s	T2iZ11R	T2iZ11S	T4iZ11S	T4iZ11R	T6iZ11R	T6P9R	T6Sp1R	AGO18IP_RSV1	AGO18IP_RSV2	AGO1bIP_RSV2	AGO1aIP_RSV1	AGO1aIP_RSV2	AGO1bIP_RSV1	wt_kit_adult	miR2_adult	miR7b_adult	miR8_adult	miR390_KO1	miR390_KO2	wt390r1	wt390r2
Signature abundances normalized to (varies by library depth):						Separator	10M	10M	10M	10M	10M	10M	10M	10M	10M	10M	500K	500K	500K	500K	500K	500K	20M	20M	20M	20M	20M	20M	20M	20M
1	ATACGATCTCATGCTTTCATC	1	2,343,138	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
2	AAGCATGAGATCGTATGAGATCA	1	2,343,153	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
3	AAGCATGAGATCGTATGAGATCACT	1	2,343,153	c	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
4	AAAGCATGAGATCGTATGAGAT	1	2,343,154	c	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
5	AAAGCATGAGATCGTATGAGATCA	1	2,343,154	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
6	TCATCTGTATAGATTGCATACATG	1	2,343,154	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
7	TGAAAGCATGAGATCGTATGA	1	2,343,156	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
8	TGAAAGCATGAGATCGTATGAGAT	1	2,343,156	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0
9	ACAGATGAAAGCATGAGATCGTAT	1	2,343,161	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
10	ACAGATGAAAGCATGAGATCGTATG	1	2,343,161	c	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
11	TTGCATACATGTCATTCTAGAACT	1	2,343,167	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
12	GCATACATGTCATTCTAGAACT	1	2,343,169	w	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
13	GCATACATGTCATTCTAGAACTTC	1	2,343,169	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1
14	ATACATGTCATTCTAGAACTTCAC	1	2,343,171	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
15	ATACATGTCATTCTAGAACTTCACA	1	2,343,171	w	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	1	2	0
16	TACATGTCATTCTAGAACTTCACA	1	2,343,172	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0
17	ACATGTCATTCTAGAACTTCACAC	1	2,343,173	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
18	ACATGTCATTCTAGAACTTCACACC	1	2,343,173	w	25	Separator	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	0
19	CATGTCATTCTAGAACTTCACACC	1	2,343,174	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0
20	ATGTCATTCTAGAACTTCACACCG	1	2,343,175	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	1	1	1
21	ATGTCATTCTAGAACTTCACACCGT	1	2,343,175	w	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1
22	GTCATTCTAGAACTTCACACCGTC	1	2,343,177	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	4	8	9	6
23	GTCATTCTAGAACTTCACACCGTCT	1	2,343,177	w	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
24	TCATTCTAGAACTTCACACCG	1	2,343,178	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
25	TCATTCTAGAACTTCACACCGT	1	2,343,178	w	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
26	TCATTCTAGAACTTCACACCGTC	1	2,343,178	w	23	Separator	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0
27	TCATTCTAGAACTTCACACCGTCT	1	2,343,178	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1
28	CATTCTAGAACTTCACACCGT	1	2,343,179	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
29	CATTCTAGAACTTCACACCGTC	1	2,343,179	w	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	1	0	1
30	CATTCTAGAACTTCACACCGTCTC	1	2,343,179	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	1	1	1
31	ATTCTAGAACTTCACACCGTC	1	2,343,180	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	71	55	447	1,091	0	0	1	1
32	ATTCTAGAACTTCACACCGTCTC	1	2,343,180	w	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
33	ATTCTAGAACTTCACACCGTCTCG	1	2,343,180	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
34	ATTCTAGAACTTCACACCGTCTCGT	1	2,343,180	w	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
35	ATGACATGTATGCAATCTATACAGA	1	2,343,181	c	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
36	TTCTAGAACTTCACACCGTCT	1	2,343,181	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0
37	TTCTAGAACTTCACACCGTCTCGT	1	2,343,181	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
38	TCTAGAACTTCACACCGTCTCGTG	1	2,343,182	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	1
39	CTAGAACTTCACACCGTCTCGT	1	2,343,183	w	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
40	CTAGAACTTCACACCGTCTCGTG	1	2,343,183	w	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1
41	GAATGACATGTATGCAATCTATAC	1	2,343,183	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
42	AGAACTTCACACCGTCTCGTGCAA	2	2,343,185	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
43	TAGAATGACATGTATGCAAT	1	2,343,185	c	20	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
44	TAGAATGACATGTATGCAATC	1	2,343,185	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	2
45	TAGAATGACATGTATGCAATCT	1	2,343,185	c	22	Separator	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
46	TAGAATGACATGTATGCAATCTA	1	2,343,185	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
47	CTAGAATGACATGTATGCAAT	1	2,343,186	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
48	CTAGAATGACATGTATGCAATC	1	2,343,186	c	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0
49	TCTAGAATGACATGTATGCAAT	1	2,343,187	c	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
50	TCTAGAATGACATGTATGCAATC	1	2,343,187	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0
51	TTCTAGAATGACATGTATGCAAT	1	2,343,188	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
52	TTCTAGAATGACATGTATGCAATC	1	2,343,188	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0
53	GTTCTAGAATGACATGTATGCAAT	1	2,343,189	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
54	AGTTCTAGAATGACATGTATGCAA	1	2,343,190	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
55	AGTTCTAGAATGACATGTATGCAAT	1	2,343,190	c	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
56	TCACACCGTCTCGTGCAAGT	2	2,343,191	w	20	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
57	ACACCGTCTCGTGCAAGTCGTTCA	1	2,343,193	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1
58	CACCGTCTCGTGCAAGTCGTTC	3	2,343,194	w	22	Separator	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
59	CACCGTCTCGTGCAAGTCGTTCA	3	2,343,194	w	23	Separator	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
60	GGTGTGAAGTTCTAGAATGACATG	1	2,343,197	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0
61	CGGTGTGAAGTTCTAGAATGACATG	1	2,343,198	c	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
62	ACGGTGTGAAGTTCTAGAATGAC	1	2,343,199	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0
63	ACGGTGTGAAGTTCTAGAATGACA	1	2,343,199	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1
64	GACGGTGTGAAGTTCTAGAATGAC	1	2,343,200	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	7	7	5	1
65	AGACGGTGTGAAGTTCTAGAATG	1	2,343,201	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
66	AGACGGTGTGAAGTTCTAGAATGA	1	2,343,201	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0
67	GAGACGGTGTGAAGTTCT	9	2,343,202	c	18	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
68	CGAGACGGTGTGAAGTTCTAGAAT	1	2,343,203	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
69	ACGAGACGGTGTGAAGTTC	8	2,343,204	c	19	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
70	ACGAGACGGTGTGAAGTTCTAGA	1	2,343,204	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
71	TTGAACGACTTGCACGAG	5	2,343,217	c	18	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
72	TTTGAACGACTTGCACGAGA	5	2,343,218	c	20	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	1
73	TTTGAACGACTTGCACGAGAC	3	2,343,218	c	21	Separator	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	10	1	1	0	0
74	TTTGAACGACTTGCACGAGACG	3	2,343,218	c	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
75	TTTGAACGACTTGCACGAGACGG	3	2,343,218	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
76	TTTGAACGACTTGCACGAGACGGT	3	2,343,218	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	3	1	1
77	AAAAATATACATGTCATTCCACAAC	1	2,343,219	w	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
78	TTTTGAACGACTTGCACGAG	5	2,343,219	c	20	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	4	0	0	0	0
79	TTTTGAACGACTTGCACGAGA	5	2,343,219	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	43	22	548	1,020	0	3	2	2
80	TTTTGAACGACTTGCACGAGAC	3	2,343,219	c	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1
81	TTTTGAACGACTTGCACGAGACGG	3	2,343,219	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
82	TTTTTGAACGACTTGCACGAG	5	2,343,220	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0
83	TTTTTGAACGACTTGCACGAGA	5	2,343,220	c	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	0	3	7
84	TTTTTGAACGACTTGCACGAGAC	3	2,343,220	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0
85	AAATATACATGTCATTCCACAACC	1	2,343,221	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
86	TTTTTTGAACGACTTGCACGA	5	2,343,221	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
87	TTTTTTGAACGACTTGCACGAG	5	2,343,221	c	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
88	TTTTTTGAACGACTTGCACGAGA	5	2,343,221	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	2	0	1	5
89	TTTTTTGAACGACTTGCACGAGAC	3	2,343,221	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	4	1
90	AATATACATGTCATTCCACAACC	1	2,343,222	w	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
91	TTTTTTTGAACGACTTGCACGA	5	2,343,222	c	22	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
92	TTTTTTTGAACGACTTGCACGAGA	5	2,343,222	c	24	Separator	0	0	1	1	0	7	3	0	0	1	0	0	0	0	0	0	1	2	3	2	0	3	1	2
93	TTTTTTTTGAACGACTTGCACGAG	5	2,343,223	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
94	TTTTTTTTGAACGACTTGCACGAGA	5	2,343,223	c	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
95	ATTTTTTTTGAACGACTTGCACGA	1	2,343,224	c	24	Separator	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0
96	TATTTTTTTTGAACGACT	13	2,343,225	c	18	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
97	ATATTTTTTTTGAACGACTTGCAC	1	2,343,226	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	11	5	4	7
98	ATGTATATTTTTTTTGAACGACT	1	2,343,230	c	23	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
99	ACATGTATATTTTTTTTGAACGACT	1	2,343,232	c	25	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
100	ATGGTTGTGGAATGACATGTATAT	1	2,343,246	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
101	AGCTCCCGGGGCAAGAGTAATGAT	1	2,343,254	w	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
102	CGGGAGCTGGTACTAATGGTT	1	2,343,261	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0
103	CTTGCATCATTACTCTTGCCC	1	2,343,282	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0
104	GCATGGAAGCAGAATGGTTT	1	2,343,285	w	20	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
105	AACCATTCTGCTTCCATGCCT	1	2,343,303	c	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
106	CATGAAGATAACGTGGAATCT	1	2,343,306	w	21	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
107	AGTTACTAGCTAGATCTGGGAGGC	1	2,343,388	c	24	Separator	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1

Number of unique reads retrieved on this page: 79