Rice small RNA Information



Reads existing in this region (Chr 1, 34,285,221 - 34,285,852):  1 - 155 of 155      


Page 1 of 1:    1    
#SequenceHitsCoordinateStrandLenSeparatorWT2003sWT2007sWT2011sT2iZ11RT2iZ11ST4iZ11ST4iZ11RT6iZ11RT6P9RT6Sp1RAGO18IP_RSV1AGO18IP_RSV2AGO1bIP_RSV2AGO1aIP_RSV1AGO1aIP_RSV2AGO1bIP_RSV1wt_kit_adultmiR2_adultmiR7b_adultmiR8_adultmiR390_KO1miR390_KO2wt390r1wt390r2
Signature abundances normalized to (varies by library depth): Separator10M10M10M10M10M10M10M10M10M10M500K500K500K500K500K500K20M20M20M20M20M20M20M20M
1AAGAAGAAATACATGTCACATCAG134,285,235w24Separator000000000000000000000100
2AAGAAATACATGTCACATCAGAGT134,285,238w24Separator000000000000001000000100
3AAGAAATACATGTCACATCAGAGTG134,285,238w25Separator000000000000000000000001
4AGAAATACATGTCACATCAGAGTG134,285,239w24Separator000000000000000000001100
5TCACATCAGAGTGACGTACTC134,285,250w21Separator010000030000000000011000
6TCACATCAGAGTGACGTACTCCCT134,285,250w24Separator000000000000000000001000
7CACATCAGAGTGACGTACTCCCTC134,285,251w24Separator000000000000000000000110
8CATCAGAGTGACGTACTCCCTC134,285,253w22Separator000000000000000000000001
9GTGACATGTATTTCTTCTTCCCCT134,285,253c24Separator000000000000000002000312
10CAGAGTGACGTACTCCCTCCGTCC134,285,256w24Separator000010000000000000000000
11TGATGTGACATGTATTTCTTCTT134,285,257c23Separator000000000000000000001000
12CTCTGATGTGACATGTATTTCTT134,285,260c23Separator000000000000001000000000
13ACTCTGATGTGACATGTATTTCT134,285,261c23Separator000000000000000000000100
14ACTCTGATGTGACATGTATTTCTT134,285,261c24Separator000003000000000000000000
15ACTCTGATGTGACATGTATTTCTTC134,285,261c25Separator000000000000000000000001
16TGACGTACTCCCTCCGTCCAAA334,285,261w22Separator000100100000000000000000
17ACGTACTCCCTCCGTCCAAAAAA1834,285,263w23Separator000000000000000100000000
18ACGTACTCCCTCCGTCCAAAAAAA1534,285,263w24Separator003021000000000000000000
19GTACTCCCTCCGTCCAAAAAAAA7234,285,265w23Separator000002000000000000000010
20GTACTCCCTCCGTCCAAAAAAAAC934,285,265w24Separator000000000000000000000100
21TACTCCCTCCGTCCAAAA43934,285,266w18Separator000000001000000000000000
22TACTCCCTCCGTCCAAAAAAA35534,285,266w21Separator000002000000000000000000
23TACTCCCTCCGTCCAAAAAAAA26134,285,266w22Separator000000000001000000000000
24ACTCCCTCCGTCCAAAAAA38434,285,267w19Separator000000000000000000000010
25ACTCCCTCCGTCCAAAAAAA36534,285,267w20Separator000000000000000000000301
26ACTCCCTCCGTCCAAAAAAAACAA834,285,267w24Separator000010000000000000000000
27ACTCCCTCCGTCCAAAAAAAACAAC134,285,267w25Separator000000000000000000000100
28GGGAGTACGTCACTCTGATGTGAC134,285,272c24Separator000000000000000000001102
29AGGGAGTACGTCACTCTGATGT134,285,273c22Separator000000000000000000000100
30AGGGAGTACGTCACTCTGATGTGA134,285,273c24Separator000000000000000000000011
31GGAGGGAGTACGTCACTCTGATGT134,285,275c24Separator000000000000000000000011
32TTTGGACGGAGGGAGTAC13234,285,282c18Separator000000000010000000001101
33TTTTGGACGGAGGGAGTA43934,285,283c18Separator000000006000000000000002
34TTTTGGACGGAGGGAGTAC12934,285,283c19Separator000000000000000000000020
35TTTTGGACGGAGGGAGTACGT2234,285,283c21Separator000000000000000000000001
36TTTTGGACGGAGGGAGTACGTC634,285,283c22Separator000010000000000000000000
37TTTTTGGACGGAGGGAGT42134,285,284c18Separator111501020011000000005767
38TTTTTGGACGGAGGGAGTA41034,285,284c19Separator006001000000000000000000
39TTTTTGGACGGAGGGAGTAC12134,285,284c20Separator000000000000000100000100
40TTTTTGGACGGAGGGAGTACGT2134,285,284c22Separator000000000000000000000001
41TTTTTGGACGGAGGGAGTACGTCACTCTGA134,285,284c30Separator000000000000000001000000
42TTTTTTGGACGGAGGGAGT38434,285,285c19Separator0000022000000000000095710
43TTTTTTGGACGGAGGGAGTA37434,285,285c20Separator000000200000000000010000
44TTTTTTGGACGGAGGGAGTAC11034,285,285c21Separator000000000000000000000100
45TTTTTTTGGACGGAGGGA40634,285,286c18Separator000000000000000000000011
46TTTTTTTGGACGGAGGGAG37834,285,286c19Separator000000000000000000000101
47TTTTTTTGGACGGAGGGAGT36534,285,286c20Separator060401000000000000101110810
48TTTTTTTGGACGGAGGGAGTA35534,285,286c21Separator000073220000000000100100
49TTTTTTTGGACGGAGGGAGTAC10534,285,286c22Separator000000000000000000000100
50TTTTTTTGGACGGAGGGAGTACGT1534,285,286c24Separator000200000000000000000130
51TTTTTTTTGGACGGAGGG32134,285,287c18Separator000001000000000000000000
52TTTTTTTTGGACGGAGGGA30034,285,287c19Separator000000004000000000000000
53TTTTTTTTGGACGGAGGGAG28034,285,287c20Separator000000000000000100000000
54TTTTTTTTGGACGGAGGGAGT27034,285,287c21Separator000001000000000010111052
55TTTTTTTTGGACGGAGGGAGTA26134,285,287c22Separator000203052001001010104032
56TTTTTTTTGGACGGAGGGAGTAC7234,285,287c23Separator000000000001000000000000
57TTTTTTTTGGACGGAGGGAGTACG1634,285,287c24Separator000000000000000000000100
58GTTTTTTTTGGACGGAGGGA5234,285,288c20Separator000000000000000000000011
59GTTTTTTTTGGACGGAGGGAGT4434,285,288c22Separator000002200000000000000100
60GTTTTTTTTGGACGGAGGGAGTA4434,285,288c23Separator004105051600000000000131
61GTTTTTTTTGGACGGAGGGAGTAC934,285,288c24Separator010000000000000000001000
62TGTTTTTTTTGGACGGAGGGAGT934,285,289c23Separator000000000000000000000110
63TGTTTTTTTTGGACGGAGGGAGTA934,285,289c24Separator000003050000000000000000
64TTGTTTTTTTTGGACGGAGGGA934,285,290c22Separator000000000700000000000000
65TTGTTTTTTTTGGACGGAGGGAG834,285,290c23Separator000000000000200000000000
66TTGTTTTTTTTGGACGGAGGGAGT834,285,290c24Separator000000001000000011000001
67CTAGGTGGTGTAACGAATAAGGTT134,285,292w24Separator000000000000000000000001
68CACCTAGGTTGTTTTTTTTGGACG134,285,298c24Separator000300000000000000000000
69CACCTAGGTTGTTTTTTTTGGACGG134,285,298c25Separator000000000000000010000000
70GGTGTAACGAATAAGGTTGTC134,285,298w21Separator000000000000000000001000
71GGTGTAACGAATAAGGTTGTCCAG134,285,298w24Separator000000000000000000001010
72GTAACGAATAAGGTTGTCCAGATT134,285,301w24Separator000000000000000010000310
73TAACGAATAAGGTTGTCCAGATT134,285,302w23Separator000000000000000000001300
74TAACGAATAAGGTTGTCCAGATTC134,285,302w24Separator000000000000000000002000
75AACGAATAAGGTTGTCCAGATT134,285,303w22Separator000000000000000000000410
76AACGAATAAGGTTGTCCAGATTCA134,285,303w24Separator000000000000000000000010
77ACGAATAAGGTTGTCCAGATT134,285,304w21Separator000000000000000000001000
78AATAAGGTTGTCCAGATTCATTAT134,285,307w24Separator000000000000000000001000
79TAAGGTTGTCCAGATTCATTATT134,285,309w23Separator000000000000000000000010
80TATTCGTTACACCACCTAGGTTGT134,285,310c24Separator000000000000000000000110
81GGTTGTCCAGATTCATTATTATAG134,285,312w24Separator000000000000000000000010
82GGTTGTCCAGATTCATTATTATAGG134,285,312w25Separator000000000000000000001000
83CCTTATTCGTTACACCACCTAGGT134,285,313c24Separator000000000000000000000001
84GTTGTCCAGATTCATTATTATAGG134,285,313w24Separator000000000000000001000000
85ACCTTATTCGTTACACCACCTAGG134,285,314c24Separator000000000000000010000000
86AACCTTATTCGTTACACCACCTAG134,285,315c24Separator000000000000000000001020
87TGTCCAGATTCATTATTATAGGTG134,285,315w24Separator000000000000000000000300
88CAACCTTATTCGTTACACC134,285,316c19Separator000000000000000000000100
89GTCCAGATTCATTATTATAGGTGA134,285,316w24Separator000000000000000000000001
90TCCAGATTCATTATTATAGGTG134,285,317w22Separator000000000000000000000010
91CTGGACAACCTTATTCGTTACACC134,285,321c24Separator000001000000000000000122
92TCTGGACAACCTTATTCGTTACACC134,285,322c25Separator000000000000000000000012
93AATCTGGACAACCTTATTCGTTAC134,285,324c24Separator000000000000000000001100
94ATAATGAATCTGGACAACC234,285,330c19Separator000000002000000000100000
95ATAATGAATCTGGACAACCTTATT134,285,330c24Separator000000000000000000001000
96AATAATGAATCTGGACAACCTTAT134,285,331c24Separator000000000000000000000001
97AATAATGAATCTGGACAACCTTATT134,285,331c25Separator000000000000000000000101
98TAATAATGAATCTGGACAACCTT134,285,332c23Separator000002000000000000000000
99ATAATAATGAATCTGGACAACCT134,285,333c23Separator000011000000000010021401
100ATAATAATGAATCTGGACAACCTT134,285,333c24Separator000002000000000000000011
101TATAATAATGAATCTGGACAACC134,285,334c23Separator000000000000000000300001
102TATAATAATGAATCTGGACAACCT134,285,334c24Separator000000009300000000001432
103CTATAATAATGAATCTGGACAACC134,285,335c24Separator200000000000000000001000
104CTATAATAATGAATCTGGACAACCT134,285,335c25Separator500000000000000000000000
105ACCTATAATAATGAATCTGGACA134,285,337c23Separator000000000000000000000100
106ACCTATAATAATGAATCTGGACAAC134,285,337c25Separator000000000000000000000300
107CACCTATAATAATGAATCTGGACA134,285,338c24Separator000000000000000000000010
108TCACCTATAATAATGAATCTGGAC134,285,339c24Separator000000000000000000000100
109ATCACCTATAATAATGAATCTGG134,285,340c23Separator000000000000000000000010
110ATCACCTATAATAATGAATCTGGA134,285,340c24Separator000000000000000000001020
111ATCAAATTCCCACCTATTTTG134,285,341w21Separator000000000000000000000010
112TATCACCTATAATAATGAATCTGG134,285,341c24Separator001000000000000000000000
113ATTTTGAAAAGGAGGGAGT334,285,365w19Separator004000000000000000000000
114TCAAAATAGACAAAATAGGTGGGA134,285,371c24Separator000000000000000000000001
115AGGGAGTAGGCAAGTAGGGAATGG134,285,377w24Separator000000000000000000000010
116TTCCCATTCCCTACTTGCCTAC134,285,403c22Separator001000000000000000000000
117ACGCTTCCCATTCCCTACTTGCCT134,285,407c24Separator000000000000000000000300
118GGGAAGTTGAACAGGTCTAGTGAC134,285,410w24Separator000101100000000000000020
119TCTAGTGACGTCCTGGTTGCA134,285,425w21Separator000000000000000000120000
120AGACCTGTTCAACTTCCCAAACGC134,285,427c24Separator000000000000000000000010
121AGACCTGTTCAACTTCCCAAACGCT134,285,427c25Separator000000000000000000000001
122ATGCAACCAGGACGTCACTAGACC134,285,446c24Separator000000000000000000020110
123CATGCAACCAGGACGTCACTAGAC134,285,447c24Separator000000000000000000000010
124ACATTCACCCGTCAGTTGCTA134,285,467w21Separator000000000000000000010000
125ATTCACCCGTCAGTTGCTATTGTC134,285,469w24Separator300000002000000000000000
126TGCTATTGTCATTGATGTGGC134,285,483w21Separator000000000000000000001000
127TGTCATTGATGTGGCTGTCACGATT134,285,489w25Separator000000100000000000000000
128CAATGACAATAGCAACTGACGGGT134,285,496c24Separator000000000000000000010011
129GTGGCTGTCACGATTGGTAGGAACT134,285,499w25Separator040000000000000000000000
130TCACGATTGGTAGGAACTAGG134,285,506w21Separator000000000000010000000000
131ACGATTGGTAGGAACTAGGAAGGG134,285,508w24Separator000000000000000000000010
132CGATTGGTAGGAACTAGGAAG134,285,509w21Separator000000000000000000010000
133TAGGAAGGGAATGGGAGGTTACTC134,285,523w24Separator000000000000000000000001
134TCCTAGTTCCTACCAATCGT134,285,527c20Separator000000000000000000010000
135TTCCTAGTTCCTACCAATCGTGAC134,285,528c24Separator000001100000000010010000
136TTACTCTTCTTGTCTAATGGA134,285,541w21Separator000000000010000000000000
137AGTAACCTCCCATTCCCTTCC134,285,545c21Separator000000000000010000000000
138GTAGTTTTGGAGCAACATTGCAGGC134,285,635c25Separator000000000000000000000100
139ATAATGCCTGCAGAGATTCAAGAA134,285,651w24Separator010500000000000000002000
140CAAGAAAAGACATAAACAG134,285,669w19Separator000000000000000000001000
141TTTCTTGAATCTCTGCAGGCA134,285,675c21Separator000000000000000000010000
142ACATAAACAGATCAACTATTTGAC134,285,678w24Separator000000000000000000001100
143TAAACAGATCAACTATTTGACT134,285,681w22Separator000000002000000000000000
144AAACAGATCAACTATTTGACTTGAC134,285,682w25Separator000000000000000000001000
145TTTATGTCTTTTCTTGAATCT134,285,684c21Separator000000000000000000010000
146AGTTGATCTGTTTATGTCTTTTCT134,285,694c24Separator000000000000000000001000
147ATAGTTGATCTGTTTATGTCT134,285,696c21Separator000000000000000000100000
148AATAGCAACGTCAAGTCAAATAGT134,285,715c24Separator001000000000000000001000
149ACTAGTATCCCGCACCGTAGCATC134,285,757c24Separator000000000000000000001000
150AAGTTGAGTAGAGTAAATAACC134,285,779w22Separator000000000000000000000100
151TCATCAAGTTTGGTTATTTACT134,285,811c22Separator000000000000000000001000
152TTCATCAAGTTTGGTTATTTACT134,285,812c23Separator000000000000000000001000
153AGATGAGCAACTGATGACTGAGT134,285,841c23Separator000000070000000000000000
154TTCCAAGATGAGCAACTGATGACT134,285,846c24Separator000000000000000000000001
155GAAGGACTAAACAAGAACCGAGGT134,285,849w24Separator040000000000000000011100



Number of unique reads retrieved on this page: 108