Rice small RNA Information



Reads existing in this region (Chr 1, 6,677,440 - 6,677,860):  1 - 118 of 118      


Page 1 of 1:    1    
#SequenceHitsCoordinateStrandLenSeparatorWT2003sWT2007sWT2011sT2iZ11RT2iZ11ST4iZ11ST4iZ11RT6iZ11RT6P9RT6Sp1RAGO18IP_RSV1AGO18IP_RSV2AGO1bIP_RSV2AGO1aIP_RSV1AGO1aIP_RSV2AGO1bIP_RSV1wt_kit_adultmiR2_adultmiR7b_adultmiR8_adultmiR390_KO1miR390_KO2wt390r1wt390r2
Signature abundances normalized to (varies by library depth): Separator10M10M10M10M10M10M10M10M10M10M500K500K500K500K500K500K20M20M20M20M20M20M20M20M
1AATCTCTGCAGCTTTAATCTG16,677,514c21Separator000000000000000000000001
2CCTCCTCGATCTCTTCGAT16,677,578c19Separator000000000000000000002100
3CCTCCTCGATCTCTTCGATC16,677,578c20Separator000000000000000010004933
4TCCTCCTCGATCTCTTCGAT16,677,579c20Separator000000000000000000001101
5TCCTCCTCGATCTCTTCGATC16,677,579c21Separator000000000000000000001000
6GACTGAAGGGTGCTCCCT26,677,596c18Separator000000000000000010000425
7GGACTGAAGGGTGCTCCC26,677,597c18Separator000000000000000000001134
8GGACTGAAGGGTGCTCCCT26,677,597c19Separator0000000000000000010012141313
9TGGACTGAAGGGTGCTCC26,677,598c18Separator000000000000010000005066
10TGGACTGAAGGGTGCTCCC26,677,598c19Separator000000000000060000009172235
11TGGACTGAAGGGTGCTCCCT26,677,598c20Separator00000100000001321000123195125208
12TTGGACTGAAGGGTGCTC26,677,599c18Separator00000000000000000000139321216395
13TTGGACTGAAGGGTGCTCC26,677,599c19Separator26310243341011020101752,2852,9834,2864,574
14TTGGACTGAAGGGTGCTCCC26,677,599c20Separator57273144564442325263550811620015241916337,25242,88447,10250,838
15TTGGACTGAAGGGTGCTCCCT26,677,599c21Separator2751581742112232182461951169928479531212,4731,6943,9242,801263,066253,916241,367261,773
16TTGGACTGAAGGGTGCTCCCTC16,677,599c22Separator0000000000000000364211275109130
17TTGGACTGAAGGGTGCTCCCTCC16,677,599c23Separator000000000000000000001011
18CTTGGACTGAAGGGTGCT16,677,600c18Separator000042000000000000105121112
19CTTGGACTGAAGGGTGCTC16,677,600c19Separator000000000000000000000764
20CTTGGACTGAAGGGTGCTCC16,677,600c20Separator216112011121422171000000114151526065
21CTTGGACTGAAGGGTGCTCCC16,677,600c21Separator88100957595816558143490100002012699496522548572
22CTTGGACTGAAGGGTGCTCCCT16,677,600c22Separator1,7801,5561,2671,5091,5641,5161,4061,6021,69762934731032,0081,4532,28882412,34912,19111,74112,059
23CTTGGACTGAAGGGTGCTCCCTC16,677,600c23Separator216012500000000018152121291515
24CTTGGACTGAAGGGTGCTCCCTCC16,677,600c24Separator000000000000000001015140
25CTTGGACTGAAGGGTGCTCCCTCCTC16,677,600c26Separator000000000000000000001000
26GCTTGGACTGAAGGGTGCTCC16,677,601c21Separator000000000000000000100010
27GCTTGGACTGAAGGGTGCTCCC16,677,601c22Separator000000000000000000101312
28GCTTGGACTGAAGGGTGCTCCCT16,677,601c23Separator000000000000000060401772220
29GCTTGGACTGAAGGGTGCTCCCTC16,677,601c24Separator000000000000000000000310
30GCTTGGACTGAAGGGTGCTCCCTCC16,677,601c25Separator000000000000000000000322
31GCTTGGACTGAAGGGTGCTCCCTCCT16,677,601c26Separator000000000000000000001000
32TGCTTGGACTGAAGGGTGCTC16,677,602c21Separator000000000000000000001331
33TGCTTGGACTGAAGGGTGCTCCC16,677,602c23Separator000000000000000010000010
34TGCTTGGACTGAAGGGTGCTCCCT16,677,602c24Separator000000000000000000000310
35TTGCTTGGACTGAAGGGTGCT16,677,603c21Separator000000000000000000010100
36TTTGCTTGGACTGAAGGGTGC16,677,604c21Separator000000000000000000000001
37TTTGCTTGGACTGAAGGGTGCT16,677,604c22Separator000000000000000000002000
38TCTTTGCTTGGACTGAAGGGT16,677,606c21Separator000000000000000000000100
39TCTTTGCTTGGACTGAAGGGTG16,677,606c22Separator000000000000000000000021
40GCCGTCTTTGCTTGGACTGAAGG16,677,610c23Separator000000000000000000011303
41GCCGTCTTTGCTTGGACTGAAGGG16,677,610c24Separator000000000000000000000100
42CGCCGTCTTTGCTTGGACTGAAGG16,677,611c24Separator000000000000000000000020
43GCGCCGTCTTTGCTTGGACTGAAGG16,677,612c25Separator000000000000000000000010
44TCGCGCCGTCTTTGCTTGGAC16,677,614c21Separator000000000000000000000001
45TCGCGCCGTCTTTGCTTGGACTGA16,677,614c24Separator030000000000000010000010
46TCTCGCGCCGTCTTTGCTTGGACT16,677,616c24Separator000000000000000000000010
47TCCGATCTCGCGCCGTCTTTG16,677,621c21Separator000000000000000000000010
48TTCCGATCTCGCGCCGTCT16,677,622c19Separator000000000000000000000010
49TTCCGATCTCGCGCCGTCTT16,677,622c20Separator000000000000000000000001
50TTCCGATCTCGCGCCGTCTTT16,677,622c21Separator000000000000000000100000
51TTCCGATCTCGCGCCGTCTTTG16,677,622c22Separator000000000000000100000000
52GTTCCGATCTCGCGCCGT16,677,623c18Separator000000000000000000000010
53GTTCCGATCTCGCGCCGTCT16,677,623c20Separator000000000000000000000010
54GTTCCGATCTCGCGCCGTCTT16,677,623c21Separator000000000000000000000001
55GTTCCGATCTCGCGCCGTCTTT16,677,623c22Separator000000000000000000000022
56GTTCCGATCTCGCGCCGTCTTTG16,677,623c23Separator000000000000000010000320
57CGTTCCGATCTCGCGCCGTC16,677,624c20Separator000000000000000000001001
58CGTTCCGATCTCGCGCCGTCT16,677,624c21Separator000000000000000000000110
59CGTTCCGATCTCGCGCCGTCTT16,677,624c22Separator000000000000000000000300
60CGTTCCGATCTCGCGCCGTCTTT16,677,624c23Separator000000000000000000004312
61CGTTCCGATCTCGCGCCGTCTTTG16,677,624c24Separator00000000000000000010917610
62GGTAACGTTCCGATCTCGCGC16,677,629c21Separator000000000000000000001000
63GGTAACGTTCCGATCTCGCGCC16,677,629c22Separator010000000000000011000101
64GGTAACGTTCCGATCTCGCGCCG16,677,629c23Separator000000000000000030012546
65GTGAATGAAGCGGGAGGTA16,677,644c19Separator000000000000010000000000
66AGTGAATGAAGCGGGAGG16,677,645c18Separator0100000000000203600000000
67AGTGAATGAAGCGGGAGGT16,677,645c19Separator040000000010041844856100000000
68AGTGAATGAAGCGGGAGGTA16,677,645c20Separator000010000001050636400000000
69AGTGAATGAAGCGGGAGGTAA16,677,645c21Separator000002000001015131300000155
70TGAGTGAATGAAGCGGGAGGT16,677,647c21Separator000000000010000000000000
71AGATGAGTGAATGAAGCGGGA16,677,650c21Separator000000000000000000000101
72ATAGCGAAGCTTAGCAGATG16,677,665c20Separator000000000000000000000001
73TGAGATAGCGAAGCTTAGCAGATG16,677,669c24Separator000000000000000000001000
74CGTTTCTTGCTTGGCATGTGGG16,677,672w22Separator000000000000000000000300
75CAAGCAAGAAACGCTTGAGATAGCGAAGC16,677,684c29Separator000000000000000000001000
76TCGGCAGCTAATTCGACCCT16,677,702w20Separator000000000000000000000100
77CCGACTCATTCACCCACATG16,677,705c20Separator000000000000000000000010
78TGCCGACTCATTCACCCA16,677,707c18Separator000000000000000000000040
79GCTGCCGACTCATTCACCCACATG16,677,709c24Separator000000000000000000000100
80AGCTGCCGACTCATTCACC16,677,710c19Separator000020000000050000706174465
81AGCTGCCGACTCATTCACCC16,677,710c20Separator6501200500000146522737178813130146311235
82AGCTGCCGACTCATTCACCCA16,677,710c21Separator666843132111010936719166406106618626782627
83AGCTGCCGACTCATTCACCCAC16,677,710c22Separator000000000000000001101101
84TAGCTGCCGACTCATTCACCC16,677,711c21Separator000000000000000000100102
85TAGCTGCCGACTCATTCACCCA16,677,711c22Separator000000000000000000002101
86TTAGCTGCCGACTCATTCACCC16,677,712c22Separator000000000000000000010000
87ATTAGCTGCCGACTCATTCAC16,677,713c21Separator000000000000000000000100
88ATTAGCTGCCGACTCATTCACC16,677,713c22Separator000000000000000000002010
89ATTAGCTGCCGACTCATTCACCC16,677,713c23Separator300000000000000002302700
90ATTAGCTGCCGACTCATTCACCCA16,677,713c24Separator0000000000000000101010712
91AATTAGCTGCCGACTCATTCACCC16,677,714c24Separator000000000000000000100100
92GTGCTAGGGTCGAATTAGCTG16,677,726c21Separator000003000000010011000003
93TGGGCGGTGCTAGGGTCGAA16,677,732c20Separator000000000000000000000010
94TGGGCGGTGCTAGGGTCGAATT16,677,732c22Separator000000000000000010000031
95ATGGGCGGTGCTAGGGTCGAATT16,677,733c23Separator000000000000000000001000
96AGTCCACTCATGGGCGGTGCTAGG16,677,742c24Separator000000000000010000000100
97GAGCGTCCTTCAGTCCACTC16,677,753c20Separator000000000000000000001000
98AGAGCGTCCTTCAGTCCA16,677,754c18Separator000000000010000000001001
99AGAGCGTCCTTCAGTCCAC16,677,754c19Separator000000000000030000000031
100AGAGCGTCCTTCAGTCCACT16,677,754c20Separator00000100003101216300012362122
101AGAGCGTCCTTCAGTCCACTC16,677,754c21Separator30310637519101012316448246316188171
102AGAGCGTCCTTCAGTCCACTCA16,677,754c22Separator00000030005202300101222988
103AGAGCGTCCTTCAGTCCACTCAT16,677,754c23Separator000000000000000000001000
104AGAGAGCGTCCTTCAGTCCACTC16,677,756c23Separator000000000000000000000001
105AGAGAGCGTCCTTCAGTCCACTCA16,677,756c24Separator000000000000000000000100
106AAGAGAGCGTCCTTCAGTC16,677,757c19Separator000000000000000000001000
107AAGAGAGCGTCCTTCAGTCCACTC16,677,757c24Separator000000000000000000000001
108TCGATGGATGGAAGAGAGCGT16,677,768c21Separator000000000000000000000100
109TCGATGGATGGAAGAGAGCGTC16,677,768c22Separator000000000000000000000412
110TCGATGGATGGAAGAGAGCGTCC16,677,768c23Separator000000000000000000004401
111ATCGATGGATGGAAGAGAG26,677,769c19Separator000000000000010000000000
112ATCGATGGATGGAAGAGAGCGTC16,677,769c23Separator000000000000000000000010
113CGATCGATGGATGGAAGAGAGC16,677,771c22Separator000000000000000000001000
114CGATCGATGGATGGAAGAGAGCGT16,677,771c24Separator000000000000000000000100
115AGCGATCGATGGATGGAAGAGAGC16,677,773c24Separator000000000400000000000000
116AAGAAGCGATCGATGGATGGAAG16,677,777c23Separator000000000000000000001100
117ATTTGATGGAAGAAGCGATCGATGGATG16,677,786c28Separator000000000000000000001000
118AGCTACATATATTAAGATCAGATC16,677,807w24Separator000000000000000000100000



Number of unique reads retrieved on this page: 107