Rice small RNA Information



Reads existing in this region (Chr 1, 20,086,207 - 20,086,629):  1 - 117 of 117      


Page 1 of 1:    1    
#SequenceHitsCoordinateStrandLenSeparatorYL9522_S3_1YL9522_S3_2YL9522_S3_3YL9522_S5_1YL9522_S5_2YL9522_S5_3YL9522_S7_1YL9522_S7_2YL9522_S7_3msp1_S3_1msp1_S3_2msp1_S3_3msp1_S5_1msp1_S5_2msp1_S5_3msp1_S7_1msp1_S7_2msp1_S7_3ostdl1a_S3_1ostdl1a_S3_2ostdl1a_S3_3ostdl1a_S5_1ostdl1a_S5_2ostdl1a_S5_3ostdl1a_S7_1ostdl1a_S7_2ostdl1a_S7_3
Signature abundances normalized to (varies by library depth): Separator5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M
1CGGCGACACGCTTGCAGTAAAGGC120,086,208c24Separator000000000000000000000000001
2GCGTACTTTCGATCCCCCCCTCAC120,086,216w24Separator000000010000000000000000000
3TTCGATCCCCCCCTCACTCGG120,086,223w21Separator000000000000000000000001100
4TTCGATCCCCCCCTCACTCGGA120,086,223w22Separator000100000000000000000000000
5AAAGTACGCTTCGCTTCGGCGACA120,086,224c24Separator000000000000100000000000000
6TCGATCCCCCCCTCACTCGGA120,086,224w21Separator000000000000010000000000000
7GGGGATCGAAAGTACGCTTCGCTT120,086,232c24Separator001000000000000000000000000
8CTCACTCGGATGAGAATAGTGGTG120,086,235w24Separator001000000000000000000000000
9TCACTCGGATGAGAATAGTGG220,086,236w21Separator000001000000000000000000000
10TCACTCGGATGAGAATAGTGGTGG120,086,236w24Separator001000000100000011000000000
11CACTCGGATGAGAATAGTGGT120,086,237w21Separator000000000000001000000000000
12CACTCGGATGAGAATAGTGGTGGA120,086,237w24Separator000000010010000000000000000
13ACTCGGATGAGAATAGTGGTGGAT120,086,238w24Separator000000001000000100000000000
14TCGGATGAGAATAGTGGTGGA120,086,240w21Separator000000000000000010000100000
15CGGATGAGAATAGTGGTGGAT120,086,241w21Separator000100000000010001000000000
16GAGTGAGGGGGGGATCGAAAG120,086,241c21Separator000000000000100000000000000
17CGAGTGAGGGGGGGATCGAAAG120,086,242c22Separator000000000000100000000000000
18ATGAGAATAGTGGTGGATTCA120,086,244w21Separator000613332000024030000316102
19TGAGAATAGTGGTGGATTCAC120,086,245w21Separator000000000000010012000010100
20TGGATTCACCGCCCGGGCAGCAC120,086,257w23Separator000001000000000000000000000
21TGGATTCACCGCCCGGGCAGCACG120,086,257w24Separator000000000100000000000000000
22CACGGGCAGCTGTGCAGGGTT120,086,277w21Separator000000000000010000000000000
23ACGGGCAGCTGTGCAGGGTTCACA120,086,278w24Separator000000000001000000000000000
24TGCTGCCCGGGCGGTGAATCCA120,086,278c22Separator000000010000000000000000000
25CGGGCAGCTGTGCAGGGTTCACA120,086,279w23Separator000000000001000000000000000
26TGAACCCTGCACAGCTGCCCGTGC120,086,299c24Separator000000000001000000000000000
27AGCGATAAACCTTGGATATTGACG120,086,301w24Separator000010000000000000000010000
28TAAACCTTGGATATTGACGCT120,086,306w21Separator000000000000000000000100000
29AAACCTTGGATATTGACGC120,086,307w19Separator000000010000000000000000000
30AAACCTTGGATATTGACGCTA120,086,307w21Separator010346235000130133000333113
31AAACCTTGGATATTGACGCTAATT120,086,307w24Separator000000000000000010000000000
32AACCTTGGATATTGACGCTA120,086,308w20Separator000000000000010000000000000
33AAGGTTTATCGCTGTGAACCC220,086,313c21Separator000000000000010000000000000
34ATATTGACGCTAATTCTTCCC120,086,316w21Separator000000001000002000000001000
35GCGTCAATATCCAAGGTTTAT120,086,325c21Separator000010000000000000000000000
36ATTCTTCCCTAAAATAGATTA120,086,328w21Separator000000000000000000000001101
37TTAGCGTCAATATCCAAGGTT120,086,328c21Separator000000001000000000000000000
38AGAATTAGCGTCAATATCCAAGGT120,086,332c24Separator000001000000000000000000000
39GAAGAATTAGCGTCAATATCC120,086,334c21Separator000000000000000000000110000
40TAAAATAGATTAGTTACCGCC120,086,337w21Separator000100010000001000000001001
41TTAGGGAAGAATTAGCGTCAA120,086,339c21Separator000100000000000000000000100
42ATAGATTAGTTACCGCCTGACCGG120,086,341w24Separator000000100000100000000000000
43AGATTAGTTACCGCCTGACCG120,086,343w21Separator000000000000000000000010000
44TATTTTAGGGAAGAATTAGCG120,086,343c21Separator000001000000000000000000000
45ATCTATTTTAGGGAAGAATTA120,086,346c21Separator000000000000000000000001000
46GTTACCGCCTGACCGGGCAAC120,086,349w21Separator000100000000000000000000000
47GTTACCGCCTGACCGGGCAACATA120,086,349w24Separator000000000100000000000000000
48TCAGGCGGTAACTAATCTATT120,086,360c21Separator000000100000000200000000000
49TCAGGCGGTAACTAATCTATTT120,086,360c22Separator000000000000000001000000000
50CGGTCAGGCGGTAACTAATCTATT120,086,363c24Separator000001000000000000000000000
51CCGGTCAGGCGGTAACTA120,086,364c18Separator000000000000000000000010000
52GCCCGGTCAGGCGGTAACTAATCT120,086,366c24Separator000000000000000000100000000
53TGCCCGGTCAGGCGGTAACTA120,086,367c21Separator251181733881132116221189101021516201239
54TTGCCCGGTCAGGCGGTAACT120,086,368c21Separator000001000000000000000000000
55TTGCCCGGTCAGGCGGTAACTA120,086,368c22Separator000001000000000000000010000
56CATATGCTTGTCAAAGGTTGG120,086,369w21Separator000000000000100000000000000
57ATATGCTTGTCAAAGGTTGGT120,086,370w21Separator021154110001410012000131001
58TATGCTTGTCAAAGGTTGGTG120,086,371w21Separator000002000000000000011200110
59CAAAGGTTGGTGTCCTGCAAACGG120,086,380w24Separator010000000000000000000000000
60AAGGTTGGTGTCCTGCAAACGGCT120,086,382w24Separator000001000000000000000000000
61CAACCTTTGACAAGCATATGT120,086,388c21Separator000000000000001000000000000
62CCAACCTTTGACAAGCATATG120,086,389c21Separator000000000000000101000000000
63GTCCTGCAAACGGCTACCCTG120,086,391w21Separator000002000000031000000002011
64ACACCAACCTTTGACAAGCAT120,086,392c21Separator000001100000000000000000000
65TCCTGCAAACGGCTACCCTGC120,086,392w21Separator110121020000121100000101100
66CTGCAAACGGCTACCCTGCAG220,086,394w21Separator100010000000010000000000000
67AGGACACCAACCTTTGACAAGCAT120,086,395c24Separator000000000000000000000010000
68TAGCCGTTTGCAGGACACCAA120,086,406c21Separator000100000000000000000000000
69GGGTAGCCGTTTGCAGGACAC120,086,409c21Separator1011711191171000099512760001389962
70AGGGTAGCCGTTTGCAGGACA120,086,410c21Separator000013000000000010000011001
71AGGCCGAAAAACCTATCGCAC120,086,413w21Separator000000001000010000000000000
72AGGCCGAAAAACCTATCGCACGATC120,086,413w25Separator000000000000000000100000100
73AAACCTATCGCACGATCGATCGCC120,086,421w24Separator000000000000000010000000000
74AGGTTTTTCGGCCTGCAGGGTA120,086,426c22Separator000000000000000000000000001
75TATCGCACGATCGATCGCCCC120,086,426w21Separator000010000000000000000000000
76CGATAGGTTTTTCGGCCTGCA120,086,430c21Separator000104120000001001000010110
77CGATCGATCGCCCCAAGTGAT120,086,433w21Separator000000000000000000000001000
78TCGATCGTGCGATAGGTTTTT120,086,439c21Separator000000000000000010000001000
79ATCGATCGTGCGATAGGTTTT120,086,440c21Separator000000000000001000000000000
80CGATCGATCGTGCGATAGGTT120,086,442c21Separator000001000000000000000000000
81GCGATCGATCGTGCGATAGGTTTT120,086,443c24Separator000000000001000000000000000
82GGCGATCGATCGTGCGATAGGTTT120,086,444c24Separator000000000000000000000002000
83CACTTGGGGCGATCGATCGT120,086,451c20Separator000001000000000000000000000
84CACTTGGGGCGATCGATCGTG120,086,451c21Separator14081010145001314001100332100
85TCACTTGGGGCGATCGATCGT120,086,452c21Separator0012810235110264138000727613
86TCACTTGGGGCGATCGATCGTG120,086,452c22Separator000001100000100000000101000
87CAGTTCCCCTCTCCCATACGG120,086,454w21Separator000100000000000000000000000
88GGAACTGATCACTTGGGGCGA120,086,460c21Separator000000100000000000000000000
89GGGGAACTGATCACTTGGG120,086,462c19Separator000000000010000000000000000
90GGGGAACTGATCACTTGGGGC120,086,462c21Separator000002000000000001000001100
91GGGGAACTGATCACTTGGGGCGAT120,086,462c24Separator000000000100000000000000000
92AGGGGAACTGATCACTTGGGG120,086,463c21Separator000010000000000000000100000
93AGGGGAACTGATCACTTGGGGCGA120,086,463c24Separator000000001010000200000000100
94GAGGGGAACTGATCACTTGGGGCG120,086,464c24Separator000000000110000000000000000
95AGAGGGGAACTGATCACTTGG120,086,465c21Separator000000000000100000000000000
96AGAGGGGAACTGATCACTTGGGGC120,086,465c24Separator000000100000000000100000001
97GTATGGGAGAGGGGAACTGAT120,086,472c21Separator000000000000000001000000100
98CGTATGGGAGAGGGGAACTGA120,086,473c21Separator000011000000000001000000000
99CCGTATGGGAGAGGGGAACTG120,086,474c21Separator000000000000000010000000000
100TTTTCCTTTTTGTCACCGCTT120,086,475w21Separator000022010000010013000020010
101TTTCCTTTTTGTCACCGCTTT120,086,476w21Separator000000000000000000000000100
102AAGGAAAACCGTATGGGAGAGGGG120,086,482c24Separator000000010000000000000000000
103AAAAAGGAAAACCGTATGGGAGAG120,086,485c24Separator000000000001000000000000000
104AAAGCGGTGACAAAAAGGAAAACC120,086,496c24Separator000100000000000000000000000
105GTAAAGCGGTGACAAAAAGGA120,086,498c21Separator000100000000000000000000000
106AGTAAAGCGGTGACAAAAAGGAAA120,086,499c24Separator000000001000010000000000000
107AAAGTAAAGCGGTGACAAAAAGGA120,086,501c24Separator000010000000000000000000000
108TTCTATTTTAGTAAGTTTATACAT320,086,501w24Separator000000000000000000000001000
109AGAAAAGTAAAGCGGTGACAA120,086,504c21Separator000000000000000000000001000
110TAGAAAAGTAAAGCGGTGACA120,086,505c21Separator000100000000000000000000000
111AATAGAAAAGTAAAGCGGTGACAA120,086,507c24Separator000000000000100000000000000
112AAAATAGAAAAGTAAAGCGGTGAC120,086,509c24Separator001000000000000000000000000
113TTACTAAAATAGAAAAGTA12120,086,514c19Separator000100000000000000000000000
114TTATACATCTGAAGTTTGTAC120,086,517w21Separator000011000000000101000000000
115AGATATATAAACTTTAGGTGT220,086,556c21Separator000001000000000000100000000
116TAAACTTTAGATATATAAACT1220,086,564c21Separator000000000000010000000000000
117AAAATTTATACACCTAAAGTTTAT3320,086,587w24Separator000000000000000100000000000



Number of unique reads retrieved on this page: 109