Rice small RNA Information



Reads existing in this region (Chr 1, 20,457,622 - 20,458,063):  1 - 184 of 184      


Page 1 of 1:    1    
#SequenceHitsCoordinateStrandLenSeparatorYL9522_S3_1YL9522_S3_2YL9522_S3_3YL9522_S5_1YL9522_S5_2YL9522_S5_3YL9522_S7_1YL9522_S7_2YL9522_S7_3msp1_S3_1msp1_S3_2msp1_S3_3msp1_S5_1msp1_S5_2msp1_S5_3msp1_S7_1msp1_S7_2msp1_S7_3ostdl1a_S3_1ostdl1a_S3_2ostdl1a_S3_3ostdl1a_S5_1ostdl1a_S5_2ostdl1a_S5_3ostdl1a_S7_1ostdl1a_S7_2ostdl1a_S7_3
Signature abundances normalized to (varies by library depth): Separator5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M
1ATCTCCTTGCCGAAACCTCCCGAG120,457,622c24Separator000000000000000000010001000
2CTAGACAACGTCTCCAAAAGGAG120,457,625w23Separator100000000000000000000000000
3ACAACGTCTCCAAAAGGAGAGAAG120,457,629w24Separator000000000000100000000000000
4ACGTTGTCTAGGCATCTCCTT120,457,635c21Separator000202002000111110000021001
5TCCAAAAGGAGAGAAGCGACA120,457,637w21Separator000000001000110210000001000
6CCAAAAGGAGAGAAGCGACA120,457,638w20Separator000000000000000000000000001
7CCAAAAGGAGAGAAGCGACAG120,457,638w21Separator310331414191117002222628222922002331524142326
8CAAAAGGAGAGAAGCGACAG120,457,639w20Separator000000100000000000000000010
9AAAAGGAGAGAAGCGACAGAACAC120,457,640w24Separator136323311430234125225203322
10AAAAGGAGAGAAGCGACAGAACACC120,457,640w25Separator001000000000000100000000000
11AAAGGAGAGAAGCGACAGAACACC120,457,641w24Separator120020133012032111212010300
12AAGGAGAGAAGCGACAGAACA120,457,642w21Separator000000000000010000000000000
13AAGGAGAGAAGCGACAGAACAC120,457,642w22Separator000000000010000000000000000
14AAGGAGAGAAGCGACAGAACACC120,457,642w23Separator000000000000010000000000000
15AAGGAGAGAAGCGACAGAACACCG120,457,642w24Separator011100011200010200301002201
16AAGGAGAGAAGCGACAGAACACCGC120,457,642w25Separator000010000000100000000000000
17AGGAGAGAAGCGACAGAACAC120,457,643w21Separator000100100000100000000100000
18AGGAGAGAAGCGACAGAACACCG120,457,643w23Separator000100000000000000010001001
19AGGAGAGAAGCGACAGAACACCGC120,457,643w24Separator636017621514132657733393257615
20AGGAGAGAAGCGACAGAACACCGCC120,457,643w25Separator000000100000000000010010010
21TTTTGGAGACGTTGTCTAGGC120,457,643c21Separator000001000000000000000000000
22TTTTGGAGACGTTGTCTAGGCATC120,457,643c24Separator001000000000000000000000000
23GGAGAGAAGCGACAGAACACCGCC120,457,644w24Separator000000000000001010000101000
24GAGAGAAGCGACAGAACACCG120,457,645w21Separator020000000000000000000000000
25GAGAGAAGCGACAGAACACCGCCG120,457,645w24Separator000140010010000000000111110
26AGAGAAGCGACAGAACACCGCCGC120,457,646w24Separator000000000002000000000000000
27TCCTTTTGGAGACGTTGTCTAGGC120,457,646c24Separator000010000000000000000000000
28GAGAAGCGACAGAACACCGCCG120,457,647w22Separator000000000010000000000000000
29AGAAGCGACAGAACACCGCCG120,457,648w21Separator010000000000000000000000000
30AGAAGCGACAGAACACCGCCGCCA120,457,648w24Separator000110023010010000200010000
31GAAGCGACAGAACACCGCCG120,457,649w20Separator000000000000000000010000000
32GAAGCGACAGAACACCGCCGCCAC120,457,649w24Separator000000000100000000000000000
33AAGCGACAGAACACCGCCGCC120,457,650w21Separator000100001000000000000100000
34AGCGACAGAACACCGCCGCCACT120,457,651w23Separator000000000000000001000000000
35AGCGACAGAACACCGCCGCCACTG120,457,651w24Separator000000000100000000001000100
36AACACCGCCGCCACTGTTCTT120,457,659w21Separator000001000000000000000100000
37GGCGGTGTTCTGTCGCTTCTCTCC120,457,667c24Separator000010000000000000000000000
38AACAGTGGCGGCGGTGTTCTG120,457,676c21Separator100112100000010100100310000
39GAACAGTGGCGGCGGTGTTCT120,457,677c21Separator000101000000010000000000000
40AAAGAACAGTGGCGGCGGTGTTCTG120,457,680c25Separator000000000000000000000000100
41TAAGGTCTCAAAGAGAGCCGA120,457,680w21Separator000000000000100000000000000
42AGGTCTCAAAGAGAGCCGAGACTG220,457,682w24Separator000000000100000000000000000
43CTTAAAGAACAGTGGCGGCGGTG120,457,683c23Separator001000000000000000000000000
44CCTTAAAGAACAGTGGCGGCGGTG120,457,684c24Separator000000000001000000000100000
45ACCTTAAAGAACAGTGGCGGC120,457,685c21Separator000000000000000000000000010
46ACCTTAAAGAACAGTGGCGGCGGT120,457,685c24Separator000001010001100000010000100
47TCTCAAAGAGAGCCGAGACTGA120,457,685w22Separator000000000000000000010000000
48CTCAAAGAGAGCCGAGACTG320,457,686w20Separator001000000000000000000000000
49GACCTTAAAGAACAGTGGCGG120,457,686c21Separator000100000001000000000000000
50GACCTTAAAGAACAGTGGCGGCG120,457,686c23Separator000000000000000000000000100
51GACCTTAAAGAACAGTGGCGGCGG120,457,686c24Separator000001000000000000101000001
52AGACCTTAAAGAACAGTGGCGG120,457,687c22Separator101000000000000000000000000
53AGACCTTAAAGAACAGTGGCGGC120,457,687c23Separator000000001001000000010000100
54AGACCTTAAAGAACAGTGGCGGCG120,457,687c24Separator121101212011020121302011121
55GAGACCTTAAAGAACAGTGGCG120,457,688c22Separator001000000000000000000000000
56GAGACCTTAAAGAACAGTGGCGG120,457,688c23Separator010001101101000000000000001
57GAGACCTTAAAGAACAGTGGCGGC120,457,688c24Separator121011213252020270150213110
58GAGACCTTAAAGAACAGTGGCGGCGG120,457,688c26Separator000000000000000010000000000
59TGAGACCTTAAAGAACAGTGG120,457,689c21Separator000000000000100000000000000
60TGAGACCTTAAAGAACAGTGGCGG120,457,689c24Separator331101311000210142023021000
61TTTGAGACCTTAAAGAACAGTGGC120,457,691c24Separator010000001010002020100010001
62GAGAGCCGAGACTGAGCTTTC120,457,692w21Separator000000000000000000000001000
63GAGCCGAGACTGAGCTTTCGTTTG120,457,694w24Separator000000000000000000001000000
64AGCCGAGACTGAGCTTTCGTTTGG120,457,695w24Separator000001000000000000000000000
65GCCGAGACTGAGCTTTCGTTTGG120,457,696w23Separator000000000000000000001000000
66GCCGAGACTGAGCTTTCGTTTGGC120,457,696w24Separator001113012010113001110101000
67GCCGAGACTGAGCTTTCGTTTGGCA120,457,696w25Separator010010000000100000000000000
68CCGAGACTGAGCTTTCGTTTGGCA120,457,697w24Separator000000000000000010000000100
69CCGAGACTGAGCTTTCGTTTGGCAC120,457,697w25Separator000000000000000000000010000
70CGAGACTGAGCTTTCGTTTGGCA120,457,698w23Separator000000000000001001000000000
71CGAGACTGAGCTTTCGTTTGGCAC120,457,698w24Separator000133101001111021010001001
72GAGACTGAGCTTTCGTTTGGCA120,457,699w22Separator000000100000000000000000000
73GAGACTGAGCTTTCGTTTGGCAC120,457,699w23Separator100101000000000000000000000
74GAGACTGAGCTTTCGTTTGGCACC120,457,699w24Separator000100000000000000010000000
75AGACTGAGCTTTCGTTTGGCA120,457,700w21Separator000315511010051242000153202
76GACTGAGCTTTCGTTTGGCAC120,457,701w21Separator0003211213000371421000033401
77ACTGAGCTTTCGTTTGGCACCCA120,457,702w23Separator000000000001000000000000000
78ACTGAGCTTTCGTTTGGCACCCAC120,457,702w24Separator010110000000000000101000000
79GAGCTTTCGTTTGGCACCCACCC120,457,705w23Separator010000000000000000000000000
80AAGCTCAGTCTCGGCTCTCTT120,457,710c21Separator000014001000110000000020211
81AAGCTCAGTCTCGGCTCTCTTT120,457,710c22Separator000000000000001000000000000
82AAGCTCAGTCTCGGCTCTCTTTGA120,457,710c24Separator000000000000000000001000000
83AAACGAAAGCTCAGTCTCGGCTC120,457,716c23Separator000000000001000000000000000
84CAAACGAAAGCTCAGTCTCGG120,457,717c21Separator000000000000100000000000000
85GCCAAACGAAAGCTCAGTCTC120,457,719c21Separator000011000000040000000110001
86TGCCAAACGAAAGCTCAGTCTCGG120,457,720c24Separator001000000000000000000000000
87TGGGTGCCAAACGAAAGCTCAGTC120,457,724c24Separator000000000000000000000000010
88GAGGGGCGAGGCCGTTAGGTGTAT120,457,730w24Separator000000000000000000001000000
89GTTAGGTGTATGTTGTGCCAT120,457,743w21Separator001113110000000000000101020
90ACCTAACGGCCTCGCCCCTCA120,457,749c21Separator000000100000000000000000000
91TACACCTAACGGCCTCGCCCC120,457,752c21Separator000100000000000000000000000
92ATACACCTAACGGCCTCGCCCCTC120,457,753c24Separator000000000000010000000000000
93AACATACACCTAACGGCCTCGCCCC120,457,756c25Separator000000000000000001000000000
94CAACATACACCTAACGGCCTC120,457,757c21Separator000000000000100000000000000
95ACAACATACACCTAACGGCCTCGC120,457,758c24Separator000000000000000000000000010
96GGCACAACATACACCTAACGG120,457,761c21Separator100011011000101200100121000
97TGGCACAACATACACCTAACGGCC120,457,762c24Separator100000000000000000000000000
98TTCAATGGGAAACATATTGCA120,457,763w21Separator000110001000000000000000000
99TCAATGGGAAACATATTGCAC120,457,764w21Separator110331210000102021000211010
100CCATTGAATGGCACAACATAC120,457,770c21Separator000000000000000010000000000
101AAACATATTGCACGCTCCACATGCT120,457,772w25Separator000000000000001000000000000
102GCTCCACATGCTCGCGTGCAA120,457,785w21Separator000000101000000110000012001
103CATGTGGAGCGTGCAATATGT120,457,794c21Separator000000000000010000000100000
104CGCGTGCAAATTAACCGCCGG120,457,797w21Separator000100000000000000000000000
105GCGAGCATGTGGAGCGTGCAA120,457,799c21Separator000000000000010000000000000
106CGCGAGCATGTGGAGCGT120,457,800c18Separator000000000000000011000000000
107CGCGAGCATGTGGAGCGTG120,457,800c19Separator000001001000100000000000000
108CGCGAGCATGTGGAGCGTGCA120,457,800c21Separator000001000000102000000000000
109CGCGAGCATGTGGAGCGTGCAATATGTT120,457,800c28Separator000000000000000000000010000
110ACGCGAGCATGTGGAGCGTGCAAT120,457,801c24Separator000000000000000001000000000
111GCACGCGAGCATGTGGAG120,457,803c18Separator000000010000000000000000100
112GCACGCGAGCATGTGGAGCGT120,457,803c21Separator034111179154182102053222071301215402814413
113ATTAACCGCCGGTGCTCATG120,457,806w20Separator000100000000000000000000000
114ATTAACCGCCGGTGCTCATGG120,457,806w21Separator100244110000233035100131731
115TTAACCGCCGGTGCTCATGG120,457,807w20Separator000000100000000000000000000
116AACCGCCGGTGCTCATGG120,457,809w18Separator000001000000000000000000000
117CCGGTGCTCATGGGTAAGGGA120,457,814w21Separator000000000000001000000000000
118TGAGCACCGGCGGTTAATTT120,457,823c20Separator000001100000000000000000000
119TGAGCACCGGCGGTTAATTTG120,457,823c21Separator000131011001411100000211111
120ATGAGCACCGGCGGTTAATT120,457,824c20Separator010001000000000000000010000
121ATGAGCACCGGCGGTTAATTT120,457,824c21Separator36128183814101212131312711121140022171981112
122ATGAGCACCGGCGGTTAATTTG120,457,824c22Separator000100000000000000000001100
123ATGAGCACCGGCGGTTAATTTGCA120,457,824c24Separator000020100000000011000001002
124GTAAGGGATACCACACAGTA120,457,827w20Separator000010000000000000000000000
125GTAAGGGATACCACACAGTAC120,457,827w21Separator000002201000034100000021200
126TACCCATGAGCACCGGCGGTT120,457,829c21Separator000000001000000000000000000
127CTTACCCATGAGCACCGGCGG120,457,831c21Separator000000000000000000000000100
128ACTGTGTGGTATCCCTTACCC120,457,845c21Separator000000000000100000000000000
129CACCGTGATTGTTTTGCCGGT120,457,847w21Separator000120011000101100000020000
130CACCGTGATTGTTTTGCCGGTT120,457,847w22Separator000100000000000000000000000
131ACCGTGATTGTTTTGCCGG120,457,848w19Separator000110000000001000000000000
132ACCGTGATTGTTTTGCCGGT120,457,848w20Separator000123000000130001000101100
133ACCGTGATTGTTTTGCCGGTT120,457,848w21Separator152215166157450122741345462392842281381261243751302392049951123
134ACCGTGATTGTTTTGCCGGTTC120,457,848w22Separator000000000000000100000000000
135CCGTGATTGTTTTGCCGGT120,457,849w19Separator000010000000000000000000000
136CCGTGATTGTTTTGCCGGTT120,457,849w20Separator000020001000000001000000011
137CCGTGATTGTTTTGCCGGTTC120,457,849w21Separator000000000000001000010000000
138GTGTACTGTGTGGTATCCCTTACC120,457,849c24Separator000010000000000000000000000
139CGGTGTACTGTGTGGTATCCC120,457,851c21Separator000001000000000001000000000
140GTGATTGTTTTGCCGGTT120,457,851w18Separator000001000000000000000000000
141GTGATTGTTTTGCCGGTTCAT120,457,851w21Separator000000000000100000000000000
142CAATCACGGTGTACTGTGTGG120,457,857c21Separator000000000000001000000000000
143CAATCACGGTGTACTGTGTGGTATC120,457,857c25Separator000000000010000000000000000
144CGGTTCATCCAGGAGATGTAG120,457,864w21Separator000000000000000000000100000
145CGGCAAAACAATCACGGTGT120,457,865c20Separator000000000000000001000000000
146CGGCAAAACAATCACGGTGTA120,457,865c21Separator000000000000000000000001001
147CCGGCAAAACAATCACGG120,457,866c18Separator000000000000001000000000000
148CCGGCAAAACAATCACGGTG120,457,866c20Separator000001000000000000000101000
149CCGGCAAAACAATCACGGTGT120,457,866c21Separator332404070271227001385638213226222213440211724
150TCATCCAGGAGATGTAGTGCT120,457,868w21Separator000001010000003001000001000
151CATCCAGGAGATGTAGTG120,457,869w18Separator000000000000000000000000100
152CATCCAGGAGATGTAGTGCT120,457,869w20Separator000000000000000021000000100
153CATCCAGGAGATGTAGTGCTG120,457,869w21Separator1053210144165721331048351031431771111471401065155147143125154131
154ATCCAGGAGATGTAGTGCTG120,457,870w20Separator000000100000000000000100000
155TGAACCGGCAAAACAATCACG120,457,870c21Separator000000000000010000000100000
156TGGATGAACCGGCAAAACAAT120,457,874c21Separator000000000000000000000100000
157TGGATGAACCGGCAAAACAATCAC120,457,874c24Separator000000000000000000000100000
158CTGGATGAACCGGCAAAACAA120,457,875c21Separator000010000000100000000000000
159TCTCCTGGATGAACCGGCAAA120,457,879c21Separator000000000000010000000000000
160CATCTCCTGGATGAACCGGCA120,457,881c21Separator000000001000000000000100000
161ACACCTGATCAAGGCTGCAGC120,457,906c21Separator000000000000001000000000000
162CCACACCTGATCAAGGCTGCA120,457,908c21Separator210152630187100101916161061511011131912712
163TATCCATGAAAACAGCCAGCG120,457,911w21Separator200953637000341443010585225
164TGGATACGCCACACCTGATCA120,457,916c21Separator010000000000000000000000100
165CAGCCAGCGGATGCCAAGCGC120,457,923w21Separator000000000000000000000010000
166GATGCCAAGCGCAGGCACTGT120,457,932w21Separator0004271000001019217000101413
167CAGGCACTGTCCTACACGGCG120,457,943w21Separator000010000000000000000000000
168CAGGCACTGTCCTACACGGCGT120,457,943w22Separator000000000000010000000000000
169TGTCCTACACGGCGTATCTGAATG120,457,950w24Separator001000000000000000000000000
170CCTACACGGCGTATCTGAATG120,457,953w21Separator000010000001010001000000000
171TACACGGCGTATCTGAATGTT120,457,955w21Separator000001000000000000000000000
172CGTATCTGAATGTTTCATCGG120,457,962w21Separator000001001000000000000000000
173TTCAGATACGCCGTGTAGGAC120,457,971c21Separator10119131439100001161273800014799106
174AGGAACCGATGAAACATTCAGA120,457,987c22Separator000010000000000000000000000
175GCATCAGGAACCGATGAAA120,457,992c19Separator000000000000100000000000000
176GCTTCGGAGGCATCAGGAACC120,458,001c21Separator000001000000221000000030000
177CTAACTAGCTTGATGGACATT120,458,002w21Separator000000000000000000000000100
178AGGCTTCGGAGGCATCAGGAACCG120,458,003c24Separator000000000000001000000000000
179TAACTAGCTTGATGGACATTG120,458,003w21Separator000000000000010000000000000
180AACTAGCTTGATGGACATTGT120,458,004w21Separator001650131000133100010032111
181AATGTCCATCAAGCTAGTTAG120,458,022c21Separator000000000000000000000000010
182TGGAAGTGCCAAGCTAGCCAT120,458,037w21Separator000000000000000000000000100
183CAAGCTAGCCATGCATAATGC120,458,046w21Separator000011000000000000000000000
184AAGCTAGCCATGCATAATGCA120,458,047w21Separator000000000000000000000000010



Number of unique reads retrieved on this page: 182