Rice small RNA Information



Reads existing in this region (Chr 1, 2,332,823 - 2,333,390):  1 - 202 of 202      


Page 1 of 1:    1    
#SequenceHitsCoordinateStrandLenSeparatorYL9522_S3_1YL9522_S3_2YL9522_S3_3YL9522_S5_1YL9522_S5_2YL9522_S5_3YL9522_S7_1YL9522_S7_2YL9522_S7_3msp1_S3_1msp1_S3_2msp1_S3_3msp1_S5_1msp1_S5_2msp1_S5_3msp1_S7_1msp1_S7_2msp1_S7_3ostdl1a_S3_1ostdl1a_S3_2ostdl1a_S3_3ostdl1a_S5_1ostdl1a_S5_2ostdl1a_S5_3ostdl1a_S7_1ostdl1a_S7_2ostdl1a_S7_3
Signature abundances normalized to (varies by library depth): Separator5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M
1CGTGTGAATCGGTTGATGCAT12,332,826c21Separator000000000010000100000000000
2AGTAGAATTTTGTAAATTGAAGGC12,332,838w24Separator001000000000000000000000000
3TTAAGTAGTGATTGAGGATCT12,332,884c21Separator000000000000000100000000000
4CTTGTTTAAGTAGTGATTGAG12,332,889c21Separator000000000000000010000000000
5TGGTGAATTCTTGTTTAAGTA12,332,898c21Separator000000000000000010000000000
6CAATGCCTGCTAAACCGCTTC12,332,934w21Separator000000001000000000000000000
7GGCATTGGCAAAATTGAATTA12,332,940c21Separator000000100000100001000000000
8CTAAACCGCTTCTGTAATTTT12,332,943w21Separator000000000000001000000000000
9TAGCAGGCATTGGCAAAATTG12,332,945c21Separator100000000000000000000000000
10TTAGCAGGCATTGGCAAAATT12,332,946c21Separator000010000000000000000000000
11GCGGTTTAGCAGGCATTGGCA12,332,951c21Separator000010000000000100000000000
12AGCGGTTTAGCAGGCATTGGC12,332,952c21Separator000000100000000000000000000
13AATTACAGAAGCGGTTTAGCA12,332,961c21Separator000000100000000000000000000
14AATTACAGAAGCGGTTTAGCAGGC12,332,961c24Separator000000000000000100000000000
15TTCTTATGTTTTAACAAGACA12,332,964w21Separator000000001000000000000000000
16TAAGAAAAAATTACAGAAGCG12,332,969c21Separator000001000000000000000000000
17AACAAGACACATTGGCTACAA12,332,976w21Separator000000000000000000000000010
18AACAAGACACATTGGCTACAACAT12,332,976w24Separator000001000000001011000000000
19ACAAGACACATTGGCTACAACATT12,332,977w24Separator000111000000010100000000000
20CAAGACACATTGGCTACAACAT12,332,978w22Separator010000000000000000000000000
21AGACACATTGGCTACAACATTGTG12,332,980w24Separator000000001000000000000000000
22TCTTGTTAAAACATAAGAAAA12,332,982c21Separator000010000000000000000000000
23GTGTAGTAATTCGCATTCAGGGCC12,333,001w24Separator000100000000000010000000000
24TGTAGTAATTCGCATTCAGGG12,333,002w21Separator010000102000012100000000100
25CACAATGTTGTAGCCAATGTG12,333,003c21Separator000000100000000101000000000
26AGTAATTCGCATTCAGGGCCG12,333,005w21Separator000000000000000010000000000
27GTAATTCGCATTCAGGGCCGC12,333,006w21Separator010006235000424366000000000
28TAATTCGCATTCAGGGCCGCA12,333,007w21Separator000000000000001000000000000
29CAGGGCCGCACATGCTCGCGG12,333,018w21Separator000000000000000001000000000
30GGCCCTGAATGCGAATTACTA12,333,024c21Separator000000112000001000000000000
31CACATGCTCGCGGTTACATAT12,333,026w21Separator000220021000001211000000000
32ACATGCTCGCGGTTACATATG12,333,027w21Separator010529020101224443000000000
33CATGCTCGCGGTTACATATGG12,333,028w21Separator000000000000110000000000000
34TGCTCGCGGTTACATATGGAG12,333,030w21Separator010000000000101000000000000
35AGCATGTGCGGCCCTGAATGC12,333,033c21Separator000000000000000100000000000
36AGCATGTGCGGCCCTGAATGCGAA12,333,033c24Separator000000010000000000000000000
37GAGCATGTGCGGCCCTGAATGCGA12,333,034c24Separator000000000000001000000000000
38GCGGTTACATATGGAGTATCA12,333,035w21Separator000000000100000000000000000
39CGGTTACATATGGAGTATCAA12,333,036w21Separator000000000000010000000000000
40GCGAGCATGTGCGGCCCTGAA12,333,036c21Separator001121516161616001131711111316000000000
41CGCGAGCATGTGCGGCCCTGA12,333,037c21Separator000000000100000000000000000
42CGCGAGCATGTGCGGCCCTGAA12,333,037c22Separator000000000000001000000000000
43TTACATATGGAGTATCAAAAT12,333,039w21Separator000000000000000010000000000
44TATGTAACCGCGAGCATGT12,333,045c19Separator000000000000000100000000000
45TATGTAACCGCGAGCATGTGC12,333,045c21Separator0007573105000314665000000000
46TGATACTCCATATGTAACCGC12,333,055c21Separator000100000000000000000000000
47TTTGATACTCCATATGTAACC12,333,057c21Separator000020100000000001000000000
48TCACTTGGCTTAATTACTAA12,333,060w20Separator000001000000000000000000000
49CAAGTGAATTTTGATACTCCA12,333,066c21Separator000010012000000000000000000
50TTAATTACTAACTCTGATAAC12,333,069w21Separator000641078100163133000000000
51ATTACTAACTCTGATAACTGTGCAT12,333,072w25Separator000100000000000000000000000
52CTAACTCTGATAACTGTGCAT12,333,076w21Separator001011011000313201000000000
53CTAACTCTGATAACTGTGCATAAG12,333,076w24Separator000000010000000000000000000
54TAACTCTGATAACTGTGCATA12,333,077w21Separator030131002000303002000000000
55AACTCTGATAACTGTGCATAAGG12,333,078w23Separator000000000000010000000000000
56AACTCTGATAACTGTGCATAAGGC12,333,078w24Separator000110200000100000000000000
57TAGTAATTAAGCCAAGTGAAT12,333,078c21Separator000000000000000010000000000
58ACTCTGATAACTGTGCATAAGGCA12,333,079w24Separator000712533011113233000001002
59CTCTGATAACTGTGCATAAGGC12,333,080w22Separator000000010000000000000000000
60CTCTGATAACTGTGCATAAGGCA12,333,080w23Separator000000000000001000000000000
61CTCTGATAACTGTGCATAAGGCAC12,333,080w24Separator000000100000000000000000000
62TCTGATAACTGTGCATAAGGC12,333,081w21Separator000000000000022000010951471
63TCTGATAACTGTGCATAAGGCA12,333,081w22Separator000000000000000001000000000
64TCTGATAACTGTGCATAAGGCACT12,333,081w24Separator000000010000001000000000000
65CTGATAACTGTGCATAAGG12,333,082w19Separator000000000000000000000001010
66CTGATAACTGTGCATAAGGC12,333,082w20Separator000000000000000101000100002
67CTGATAACTGTGCATAAGGCA12,333,082w21Separator000000000101101011323140494242562931
68TGATAACTGTGCATAAGGCA12,333,083w20Separator000000000000000000000200000
69GATAACTGTGCATAAGGCACTGAG12,333,084w24Separator000000000000000100000000000
70ATAACTGTGCATAAGGCACTG12,333,085w21Separator000000000000001000000000000
71TATCAGAGTTAGTAATTAAGC12,333,087c21Separator000100000000000200000000000
72TATCAGAGTTAGTAATTAAGCC12,333,087c22Separator000000000000010000000000000
73TGTGCATAAGGCACTGAGATC12,333,090w21Separator000000010000000100000000000
74TGCATAAGGCACTGAGATC12,333,092w19Separator000000000100000000000000000
75TGCATAAGGCACTGAGATCGG12,333,092w21Separator0201120001000242110004483712
76TGCATAAGGCACTGAGATCGGC12,333,092w22Separator000000010000000000000000000
77TGCATAAGGCACTGAGATCGGCT12,333,092w23Separator000000000000000001000000000
78GCATAAGGCACTGAGATCGGC12,333,093w21Separator000000000000011000000021001
79GCATAAGGCACTGAGATCGGCT12,333,093w22Separator000000000000100000000000000
80CATAAGGCACTGAGATCGGCT12,333,094w21Separator201100011100301001000000000
81CATAAGGCACTGAGATCGGCTA12,333,094w22Separator000001000000000000000000000
82ATAAGGCACTGAGATCGGCT12,333,095w20Separator000000100000000000000000000
83ATAAGGCACTGAGATCGGCTA12,333,095w21Separator000102110100101011000000000
84ATAAGGCACTGAGATCGGCTAA12,333,095w22Separator000110020000001100000000000
85ATAAGGCACTGAGATCGGCTAATC12,333,095w24Separator000001000000000000000000000
86TAAGGCACTGAGATCGGCT12,333,096w19Separator000000001000000000000000000
87TAAGGCACTGAGATCGGCTA12,333,096w20Separator000210000000102010000000000
88TAAGGCACTGAGATCGGCTAA12,333,096w21Separator33181156102012324771100000000
89TAAGGCACTGAGATCGGCTAAT12,333,096w22Separator011103000000040132000000000
90TAAGGCACTGAGATCGGCTAATCA12,333,096w24Separator000000000010000000000000000
91AGGCACTGAGATCGGCTAATCAGA12,333,098w24Separator000010000000000000000000000
92GGCACTGAGATCGGCTAATCAGAT12,333,099w24Separator000000000000010000000000000
93CCTTATGCACAGTTATCAGA12,333,100c20Separator000000000000000000000000001
94CCTTATGCACAGTTATCAGAG12,333,100c21Separator000000000000000100000301115
95GCACTGAGATCGGCTAATCAG12,333,100w21Separator000000001000000010000000000
96ACTGAGATCGGCTAATCAGAT12,333,102w21Separator000000000000000001000000000
97ACTGAGATCGGCTAATCAGATGGC12,333,102w24Separator000010000000000100000000000
98CTGAGATCGGCTAATCAGATG12,333,103w21Separator000000000000000002000000000
99CTGAGATCGGCTAATCAGATGG12,333,103w22Separator000000000010000000000000000
100TGAGATCGGCTAATCAGATGG12,333,104w21Separator000000110000131110000000000
101TGAGATCGGCTAATCAGATGGC12,333,104w22Separator000000001000000000000000000
102TGAGATCGGCTAATCAGATGGCAT12,333,104w24Separator000000000000010000000000000
103AGATCGGCTAATCAGATGGCAT12,333,106w22Separator000010000000000000000000000
104ATCGGCTAATCAGATGGCATT12,333,108w21Separator000000000000002000000000000
105CGGCTAATCAGATGGCATTGA12,333,110w21Separator000000000000100000000000000
106GGCTAATCAGATGGCATTGAG12,333,111w21Separator000100011000000002000000000
107TAATCAGATGGCATTGAGATC12,333,114w21Separator000000000000001000000000000
108TAATCAGATGGCATTGAGATCC12,333,114w22Separator000100000000000000000000000
109AATCAGATGGCATTGAGATCC12,333,115w21Separator000010000000000000000000000
110ATCAGATGGCATTGAGATCCTGAG12,333,116w24Separator000000000000100000000000000
111TTAGCCGATCTCAGTGCCTTAT12,333,116c22Separator000000000000000010000000000
112TCAGATGGCATTGAGATCCTG12,333,117w21Separator000000000000000010000000000
113TCAGATGGCATTGAGATCCTGA12,333,117w22Separator000000000000100000000000000
114CAGATGGCATTGAGATCCTGA12,333,118w21Separator000000000000100000000000000
115AGATGGCATTGAGATCCTGAG12,333,119w21Separator000000001000000011000000000
116TGATTAGCCGATCTCAGTGCC12,333,119c21Separator000010000000000000000000000
117TCTGATTAGCCGATCTCAGTG12,333,121c21Separator000100213000011020000000000
118GCATTGAGATCCTGAGCCGTCGGT12,333,124w24Separator000001000000000000000000000
119CATTGAGATCCTGAGCCGTCGG12,333,125w22Separator000010000000000000000000000
120ATTGAGATCCTGAGCCGTCGG12,333,126w21Separator000000010000000000000000000
121ATTGAGATCCTGAGCCGTCGGT12,333,126w22Separator100000000000000001000000000
122ATTGAGATCCTGAGCCGTCGGTAC12,333,126w24Separator000000010000001000000000000
123TTGAGATCCTGAGCCGTCGGT12,333,127w21Separator000001011000000011000000000
124TTGAGATCCTGAGCCGTCGGTA12,333,127w22Separator010021000000012210000000000
125AATGCCATCTGATTAGCCGAT12,333,128c21Separator000000000000010000000000000
126TGAGATCCTGAGCCGTCGGTA12,333,128w21Separator000334033100013020000000000
127TGAGATCCTGAGCCGTCGGTAC12,333,128w22Separator100011000000010000000000000
128CAATGCCATCTGATTAGCCG12,333,129c20Separator000000100000000000000000000
129CAATGCCATCTGATTAGCCGA12,333,129c21Separator310313325313518202192444283833000000000
130GAGATCCTGAGCCGTCGGTAC12,333,129w21Separator000001000000000010000000000
131GAGATCCTGAGCCGTCGGTACTAG12,333,129w24Separator000301000000400010000000000
132AGATCCTGAGCCGTCGGTACTAG12,333,130w23Separator000100000000000000000000000
133TCAATGCCATCTGATTAGCCG12,333,130c21Separator000000000000001000000000000
134GATCCTGAGCCGTCGGTACTA12,333,131w21Separator000210112000000001000000000
135GATCCTGAGCCGTCGGTACTAG12,333,131w22Separator000000000000010000000000000
136ATCCTGAGCCGTCGGTAC12,333,132w18Separator000000000000000001000000000
137ATCCTGAGCCGTCGGTACTA12,333,132w20Separator0112260211005104222000000000
138ATCCTGAGCCGTCGGTACTAG12,333,132w21Separator776506965383949953496062644664100000000
139TCCTGAGCCGTCGGTACTAG12,333,133w20Separator000022200000101000000000000
140TCCTGAGCCGTCGGTACTAGGTAC12,333,133w24Separator000000000000000100000000000
141CCTGAGCCGTCGGTACTAG12,333,134w19Separator000010000000000000000000000
142CTGAGCCGTCGGTACTAG12,333,135w18Separator000000011000000000000000000
143CTGAGCCGTCGGTACTAGGTA12,333,135w21Separator000000000000001000000000000
144TGAGCCGTCGGTACTAGGTAC12,333,136w21Separator000010000000000000000000000
145ACCGACGGCTCAGGATCT12,333,147c18Separator000000000000100000000000000
146TACCGACGGCTCAGGATCT12,333,148c19Separator000000000000010000000000000
147GTACCGACGGCTCAGGATCTC12,333,149c21Separator000100010000001000000000000
148AGTACCGACGGCTCAGGA12,333,150c18Separator000010000000000000000000000
149AGTACCGACGGCTCAGGAT12,333,150c19Separator000001000000000000000000000
150AGTACCGACGGCTCAGGATC12,333,150c20Separator000115326000664610000000000
151AGTACCGACGGCTCAGGATCT12,333,150c21Separator583036307321381211202219362724312342326333306365400000100
152AGTACCGACGGCTCAGGATCTC12,333,150c22Separator000210000000120100000000000
153AGTACCGACGGCTCAGGATCTCAA12,333,150c24Separator010100000000000000000000000
154TAGGTACCTCGCAGTTCTGGG12,333,150w21Separator000010000000000000000000000
155TAGTACCGACGGCTCAGGATC12,333,151c21Separator100110011000010000000000000
156CTAGTACCGACGGCTCAGGAT12,333,152c21Separator000001010000011100000000000
157CCTAGTACCGACGGCTCAGGA12,333,153c21Separator000011000000000000000000000
158GTACCTCGCAGTTCTGGGAGT12,333,153w21Separator000010000000010010000000000
159TACCTAGTACCGACGGCTCAG12,333,155c21Separator000000000000000012000000000
160TCTGGGAGTGAAAACGATTGT12,333,165w21Separator000000001000000000000010000
161CAGAACTGCGAGGTACCTAGT12,333,168c21Separator000000000000000100000000000
162CCAGAACTGCGAGGTACCTAG12,333,169c21Separator000000001000000000000000000
163CCCAGAACTGCGAGGTACCTA12,333,170c21Separator000000000000001000000000000
164TCCCAGAACTGCGAGGTAC12,333,171c19Separator000000002000000000000000000
165TCCCAGAACTGCGAGGTACC12,333,171c20Separator000001000000000210000000000
166TCCCAGAACTGCGAGGTACCT12,333,171c21Separator2001515161711150211319249810000000000
167TCCCAGAACTGCGAGGTACCTA12,333,171c22Separator000000001000000000000000000
168TGAAAACGATTGTGATTCAGT12,333,173w21Separator000001000000000000000000000
169TGAAAACGATTGTGATTCAGTA12,333,173w22Separator000000200000000000000000000
170GAAAACGATTGTGATTCAGTA12,333,174w21Separator141241316615000051111000000000
171TTGTGATTCAGTAGAAAGAAG12,333,182w21Separator000000000000001000000000000
172TGATTCAGTAGAAAGAAGTT12,333,185w20Separator000010000000000000000000000
173TGATTCAGTAGAAAGAAGTTC12,333,185w21Separator000001000000011001000000000
174ATTCAGTAGAAAGAAGTTCAT12,333,187w21Separator000001110000000000000000000
175TCACAATCGTTTTCACTCCCA12,333,187c21Separator000100000100000000000000000
176TTCAGTAGAAAGAAGTTCATG12,333,188w21Separator000010000000001000000000000
177CAGTAGAAAGAAGTTCATGTC12,333,190w21Separator000000001000000000000000000
178CAGTAGAAAGAAGTTCATGTCCAG12,333,190w24Separator000000000000001000000000000
179AGTAGAAAGAAGTTCATGTCCAGCA12,333,191w25Separator000000000000100000000000000
180CTGAATCACAATCGTTTTCAC12,333,192c21Separator000010011000020011000000000
181GAAAGAAGTTCATGTCCAGCA12,333,195w21Separator000000001000000100000000001
182AGCAGGGGTAAGTTCAGACGCC12,333,212w22Separator000000000000010000000000000
183TGGACATGAACTTCTTTCTAC12,333,212c21Separator000000100000000000000000000
184CTGGACATGAACTTCTTTC12,333,213c19Separator000000010000000000000000000
185CTGGACATGAACTTCTTTCT12,333,213c20Separator000000000000000100000000010
186CTGGACATGAACTTCTTTCTA12,333,213c21Separator000130215010124312001322437
187AGGGGTAAGTTCAGACGCCTA12,333,215w21Separator000100000000101000000000000
188GGGGTAAGTTCAGACGCC12,333,216w18Separator000000000000100010000000000
189GGGGTAAGTTCAGACGCCT12,333,216w19Separator000000000000001000000000000
190GGGGTAAGTTCAGACGCCTA12,333,216w20Separator001011000000002000000000000
191GGGGTAAGTTCAGACGCCTAA12,333,216w21Separator001215221001604122000000000
192AGGCGTCTGAACTTACCCCT12,333,234c20Separator000010000000100000000000000
193AGGCGTCTGAACTTACCCCTG12,333,234c21Separator240101518965111201921111011000000000
194AGGCGTCTGAACTTACCCCTGC12,333,234c22Separator000100000000001000000000000
195AGGCGTCTGAACTTACCCCTGCTG12,333,234c24Separator000100101000001000000000000
196AATTGAAAACTCCTGATGT12,333,237w19Separator000000000000000000000100000
197ACATCAGGAGTTTTCAAT12,333,255c18Separator000000000000000000000000001
198ACATCAGGAGTTTTCAATTT12,333,255c20Separator000000000000100000000000000
199ACATCAGGAGTTTTCAATTTT12,333,255c21Separator100111000010410311000410020
200AAGCATGAGAGACATCAGGAG12,333,266c21Separator000010000000000000000000000
201ATGAAGTAGCATCGATCTGAT12,333,281w21Separator000000001000000000000000000
202TCTGATCAGGTACTTGTCGATA12,333,296w22Separator000000000000000100000000000



Number of unique reads retrieved on this page: 202