Rice small RNA Information



Reads existing in this region (Chr 1, 34,290,910 - 34,291,438):  1 - 201 of 201      


Page 1 of 1:    1    
#SequenceHitsCoordinateStrandLenSeparatorYL9522_S3_1YL9522_S3_2YL9522_S3_3YL9522_S5_1YL9522_S5_2YL9522_S5_3YL9522_S7_1YL9522_S7_2YL9522_S7_3msp1_S3_1msp1_S3_2msp1_S3_3msp1_S5_1msp1_S5_2msp1_S5_3msp1_S7_1msp1_S7_2msp1_S7_3ostdl1a_S3_1ostdl1a_S3_2ostdl1a_S3_3ostdl1a_S5_1ostdl1a_S5_2ostdl1a_S5_3ostdl1a_S7_1ostdl1a_S7_2ostdl1a_S7_3
Signature abundances normalized to (varies by library depth): Separator5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M5M
1AAAAAAAAAAAAAAAAAAA2,14934,290,964w19Separator000000000000000100000000000
2AAAAAAAAAAAAAAAAAAAA1,84034,290,964w20Separator000000000000000010000000000
3AAAAAAAAAAAAAAAAAAAAA1,59334,290,964w21Separator000000100000000000000000000
4AAAAAAAAAAAAAAAAAAA2,14934,290,965w19Separator000000000000000100000000000
5AAAAAAAAAAAAAAAAAAAA1,84034,290,965w20Separator000000000000000010000000000
6AAAAAAAAAAAAAAAAAAA2,14934,290,966w19Separator000000000000000100000000000
7ACCAACATGTATAGGAACGGG134,291,009w21Separator000001000000000000000000000
8CAACATGTATAGGAACGGGAT134,291,011w21Separator000000000000010000000000100
9AACATGTATAGGAACGGGATG134,291,012w21Separator000000000000000100000000000
10ATAGGAACGGGATGCGTTGGG134,291,019w21Separator000001000000000000000000000
11TAGGAACGGGATGCGTTGGGA134,291,020w21Separator000000000000000010000000000
12CGGGATGCGTTGGGAAGTTGA134,291,026w21Separator000000000000000001000000000
13GCGTTGGGAAGTTGAGCAGGA134,291,032w21Separator100010000000121000110011000
14TTGGGAAGTTGAGCAGGA134,291,035w18Separator000000010000000000000001000
15TTGGGAAGTTGAGCAGGAGAT134,291,035w21Separator000001000000000000000100000
16TGGGAAGTTGAGCAGGAGATA134,291,036w21Separator000000000000001000000000000
17TTGAGCAGGAGATAGAGGAGACAT134,291,043w24Separator000101000000000000000000000
18TGAGCAGGAGATAGAGGAGAC134,291,044w21Separator000000010000000000000000000
19CAGGAGATAGAGGAGACATGA134,291,048w21Separator010000000010000010000000000
20CTGCTCAACTTCCCAACGCAT134,291,050c21Separator000000000000100010000000000
21GAGATAGAGGAGACATGACAG134,291,051w21Separator000000001000000000000000000
22GATAGAGGAGACATGACAG134,291,053w19Separator010000000000000000000000000
23GATAGAGGAGACATGACAGG134,291,053w20Separator100001010000000000010000000
24GATAGAGGAGACATGACAGGT134,291,053w21Separator18251638331164225505384268371037245313940147
25ATAGAGGAGACATGACAGGTG134,291,054w21Separator000100000000000000000001000
26TAGAGGAGACATGACAGGTGC134,291,055w21Separator000000000000100000000000000
27TAGAGGAGACATGACAGGTGCA134,291,055w22Separator000000000000001000000000000
28AGAGGAGACATGACAGGT134,291,056w18Separator000000100000000000000000000
29AGAGGAGACATGACAGGTGCA134,291,056w21Separator100000000000000000000000000
30AGGAGACATGACAGGTGCATA134,291,058w21Separator000000000000000000000001000
31CTGTCATGTCTCCTCTATCTC134,291,071c21Separator000000010000011010000110120
32GCATATGCCCACATGAAGTTC134,291,074w21Separator012124102110310002000052302
33ACTTCATGTGGGCATATGCAC134,291,092c21Separator0223214115201382113011261003
34CAAGCATGGCCACCTTGACAA134,291,095w21Separator556473931271926343363729393537235443440294542
35TTGGAACTTCATGTGGGCATA134,291,097c21Separator000000020000000111010000023
36CTTGGAACTTCATGTGGGCAT134,291,098c21Separator000010000000000000000010010
37TGCTTGGAACTTCATGTGGGC134,291,100c21Separator000000000000000000000100000
38CATGCTTGGAACTTCATGTGGGC134,291,102c23Separator000000000000000000000010000
39TGACAAATTAGTACTTGCATG134,291,110w21Separator000000000000000000001000000
40CAAATTAGTACTTGCATGGCC134,291,113w21Separator000000000000100000000000000
41GTCAAGGTGGCCATGCTTGGA134,291,113c21Separator010013001000200101000031000
42ATTAGTACTTGCATGGCC134,291,116w18Separator000010000000000000000000000
43ATTAGTACTTGCATGGCCTC134,291,116w20Separator100000000000100000000000000
44ATTAGTACTTGCATGGCCTCG134,291,116w21Separator43351113788203111913131003018714897
45ATTAGTACTTGCATGGCCTCGA134,291,116w22Separator000000000000000000000000100
46TTAGTACTTGCATGGCCTCGA134,291,117w21Separator000000100000000000000000000
47AGTACTTGCATGGCCTCGAGAA134,291,119w22Separator000000000000000010000000000
48TACTAATTTGTCAAGGTGGCC134,291,122c21Separator000000000000000000000100000
49AGGCCATGCAAGTACTAATT134,291,134c20Separator000002000000100000000010000
50AGGCCATGCAAGTACTAATTT134,291,134c21Separator12091320610701119181162301031318413
51AGAAGTATATTTGCCCCTCTG134,291,137w21Separator3521315207118215131219875231151911637
52AGAAGTATATTTGCCCCTCTGA134,291,137w22Separator001031010000200011000001000
53TCGAGGCCATGCAAGTACTAA134,291,137c21Separator000000100000000000000000000
54CTCGAGGCCATGCAAGTACTA134,291,138c21Separator000001000000000000000000000
55GAAGTATATTTGCCCCTCT134,291,138w19Separator000001000000000000000000000
56GAAGTATATTTGCCCCTCTGA134,291,138w21Separator000000001000000000000000000
57TCTCGAGGCCATGCAAGTACT134,291,139c21Separator000010000000000000000000000
58TTCTCGAGGCCATGCAAGTACT134,291,140c22Separator000000000100000000000000000
59TACTTCTCGAGGCCATGCAAG134,291,143c21Separator000000000000000000000001000
60TTGCCCCTCTGAGGCAGCTGTC134,291,147w22Separator000000000000100000000000000
61CAAATATACTTCTCGAGGCCA134,291,149c21Separator000000000000000000000000100
62GCAAATATACTTCTCGAGGCC134,291,150c21Separator000000000000010000000000000
63GGGGCAAATATACTTCTCG134,291,153c19Separator000000000000000000000000010
64AGGGGCAAATATACTTCTCG134,291,154c20Separator000010100000001000000101000
65AGGGGCAAATATACTTCTCGA134,291,154c21Separator000000000000000000000010000
66GAGGGGCAAATATACTTC134,291,155c18Separator000100000000000000000000000
67GAGGGGCAAATATACTTCT134,291,155c19Separator000000010000000000000100000
68GAGGGGCAAATATACTTCTCG134,291,155c21Separator000001000000000000000001000
69AGAGGGGCAAATATACTTCTCG134,291,156c22Separator000001000000000000000000000
70AGGCAGCTGTCACGGTGGG134,291,158w19Separator000000000010000000000000000
71AGGCAGCTGTCACGGTGGGT134,291,158w20Separator000001010000010000000001000
72AGGCAGCTGTCACGGTGGGTA134,291,158w21Separator101552222541512152442833271118100471430261446
73AGGCAGCTGTCACGGTGGGTAGGAA134,291,158w25Separator000000000000000000000000001
74CAGCTGTCACGGTGGGTAGGA134,291,161w21Separator010000000000000000000000000
75AGCTGTCACGGTGGGTAGGAA134,291,162w21Separator000000000000000001000000000
76AGCTGTCACGGTGGGTAGGAAC134,291,162w22Separator000000001000001000000000000
77GCTGTCACGGTGGGTAGGAAC134,291,163w21Separator000000000000001000000000000
78TGTCACGGTGGGTAGGAACGC134,291,165w21Separator000000100000000000000000000
79TCACGGTGGGTAGGAACGCAA134,291,167w21Separator000200000100011110000001001
80CACGGTGGGTAGGAACGCAAG134,291,168w21Separator000000000000000000000100000
81CGGTGGGTAGGAACGCAAGGG134,291,170w21Separator000101000000000000000000000
82GTGGGTAGGAACGCAAGGGAA134,291,172w21Separator000000000000000000000001010
83TGGGTAGGAACGCAAGGGAAG134,291,173w21Separator000211000000000201000001000
84GGTAGGAACGCAAGGGAAGAT134,291,175w21Separator000001000000000000000000000
85CCCACCGTGACAGCTGCCTCA134,291,176c21Separator200022001000310201000120000
86GTAGGAACGCAAGGGAAGATG134,291,176w21Separator000000000000000100000000000
87TAGGAACGCAAGGGAAGATGT134,291,177w21Separator000000001000000000000000000
88GGAACGCAAGGGAAGATGTGT134,291,179w21Separator000125111000011110000121001
89GGAACGCAAGGGAAGATGTGTG134,291,179w22Separator000100000000000000000000001
90GGAACGCAAGGGAAGATGTGTGTT134,291,179w24Separator000000010000000001000000000
91CCTACCCACCGTGACAGCTGC134,291,180c21Separator000001000000000000000000000
92ACGCAAGGGAAGATGTGTGTT134,291,182w21Separator000001000000000000000000000
93GCAAGGGAAGATGTGTGTTCT134,291,184w21Separator000000010000000000000000010
94AAGGGAAGATGTGTGTTCTTGC134,291,186w22Separator000010000000000000000000000
95AGGGAAGATGTGTGTTCTTGC134,291,187w21Separator000000010000100000000010000
96ACATCTTCCCTTGCGTTCCTA134,291,197c21Separator020454565111476211101150122
97GTTCTTGCCAAACGGAGGACA134,291,200w21Separator100124200200570411010144000
98GTTCTTGCCAAACGGAGGACAA134,291,200w22Separator000000000000000000000010000
99GTTCTTGCCAAACGGAGGACAAGC134,291,200w24Separator000000000000000010000000000
100TTCTTGCCAAACGGAGGACAA134,291,201w21Separator010433001000103000000000212
101TCTTGCCAAACGGAGGACA134,291,202w19Separator000000000000100000000000000
102TCTTGCCAAACGGAGGACAAG134,291,202w21Separator000000000000000000000001000
103TTGCCAAACGGAGGACAAGCT134,291,204w21Separator001010011000000101000201000
104TGCCAAACGGAGGACAAGCTA134,291,205w21Separator000000100000101000000001000
105GCCAAACGGAGGACAAGCTAC134,291,206w21Separator000001000000000000000000000
106TCCTCCGTTTGGCAAGAAC134,291,218c19Separator000000000000000000000000001
107TCCTCCGTTTGGCAAGAACAC134,291,218c21Separator000111100000432010000042011
108TTGTCCTCCGTTTGGCAAGAACAC134,291,221c24Separator000001000000020000000002000
109TCAAGACTCAAGAGTAGCTT134,291,239c20Separator000000100000000100000000000
110TCAAGACTCAAGAGTAGCTTG134,291,239c21Separator0106147882131894037001558118
111CACAGGGAGATGGAGGAGGA134,291,242w20Separator000010000000200000000000000
112CACAGGGAGATGGAGGAGGAG134,291,242w21Separator333341221101325014715152219215332351282717
113CACAGGGAGATGGAGGAGGAGC134,291,242w22Separator000100000000000000000000001
114ATGGAGGAGGAGCTAGAGGAG134,291,251w21Separator000000000000000001000000000
115ATGGAGGAGGAGCTAGAGGAGGTG134,291,251w24Separator000000000000000000000100000
116GAGGAGGAGCTAGAGGAGGTG134,291,254w21Separator100000000000000000000000000
117GAGGAGCTAGAGGAGGTGCCA134,291,257w21Separator000000001000000000000000000
118CTAGAGGAGGTGCCACTGCCG134,291,263w21Separator101303010101222011112121013
119TAGAGGAGGTGCCACTGCCGT134,291,264w21Separator000010000000000000000001000
120GCAGTGGCACCTCCTCTAGCT134,291,281c21Separator100000000010000001000010000
121TTGCCAAACATGTATTCTC134,291,284w19Separator000000001000000000000000000
122TTGCCAAACATGTATTCTCAC134,291,284w21Separator000861161560008547451111186863
123GCAACGGCAGTGGCACCTCCTC134,291,287c22Separator001000000000000000000000000
124TGGCAACGGCAGTGGCACCTC134,291,289c21Separator000000010000000000000000000
125TTGGCAACGGCAGTGGCACCT134,291,290c21Separator0001312103932006311710821010107276
126TTGGCAACGGCAGTGGCACCTC134,291,290c22Separator000000000000010000000000000
127TTTGGCAACGGCAGTGGCACC134,291,291c21Separator000000001000000010010000000
128TTTGGCAACGGCAGTGGCACCT134,291,291c22Separator000100000000000000000000000
129ATGTATTCTCACTCCAAACCA134,291,293w21Separator000000000000001000000000000
130TGTTTGGCAACGGCAGTGGCAC134,291,293c22Separator000000000000100000000000000
131TGTTTGGCAACGGCAGTGGCACC134,291,293c23Separator000000000000000000000100000
132TACATGTTTGGCAACGGCAGT134,291,297c21Separator000001000000000000000000000
133GAGAATACATGTTTGGCAACG134,291,302c21Separator000001000000000000000000000
134TCCAAACCAATAATCCGCCTT134,291,305w21Separator000010001000000001000010000
135ATAATCCGCCTTTGTGGGCTC134,291,314w21Separator000100000000000000000000000
136CCTTTGTGGGCTCGTAGCTGT134,291,322w21Separator000000100100100000000000000
137GGCGGATTATTGGTTTGGAGT134,291,323c21Separator205228110102562011101453000
138AGGCGGATTATTGGTTTGGAG134,291,324c21Separator010032100100122010001010100
139AGGCGGATTATTGGTTTGGAGT134,291,324c22Separator000000000000000001000000000
140AAAGGCGGATTATTGGTTTGGAGT134,291,326c24Separator000000000000000000000000100
141TGTGGGCTCGTAGCTGTCGC134,291,326w20Separator000000001000000000000000000
142TGTGGGCTCGTAGCTGTCGCG134,291,326w21Separator4022219137201400071477137331111711383
143CAAAGGCGGATTATTGGTTT134,291,327c20Separator000000000000000100000000000
144GTGGGCTCGTAGCTGTCGCGC134,291,327w21Separator000000000000000000000010000
145ACAAAGGCGGATTATTGGTTT134,291,328c21Separator000000000000010000000000000
146CACAAAGGCGGATTATTGGTT134,291,329c21Separator000000001010000010000000100
147CCCACAAAGGCGGATTATTGG134,291,331c21Separator000000001000000000000000000
148CGACAGCTACGAGCCCAC134,291,344c18Separator000000000000000000000000010
149CGACAGCTACGAGCCCACAA134,291,344c20Separator000000000000100000000000000
150CGACAGCTACGAGCCCACAAA134,291,344c21Separator010003100001203300010101022
151CGCGACAGCTACGAGCCCACA134,291,346c21Separator000001000000000000000000000
152GCGCGACAGCTACGAGCCCAC134,291,347c21Separator000000000000001000000000100
153ATGGAGCGCGCGGCGCTGGCG134,291,365c21Separator010103111000548021000332010
154AACATGGAGCGCGCGGCGCTG134,291,368c21Separator010000000000000000000000000
155TCTCTTGCCAAATGCTATTT134,291,368w20Separator000000001000000000000000000
156TCTCTTGCCAAATGCTATTTT134,291,368w21Separator000000000000000001000010000
157GAGAACATGGAGCGCGCGGCG134,291,371c21Separator000000000000000000001000000
158AGAGAACATGGAGCGCGCGGC134,291,372c21Separator000000100010000000000000100
159AAGAGAACATGGAGCGCGCGG134,291,373c21Separator000001000000100000000000100
160CAAGAGAACATGGAGCGC134,291,374c18Separator000000000000010000000000000
161CAAGAGAACATGGAGCGCGCG134,291,374c21Separator221251913101918221181210614842017615131310
162GCAAGAGAACATGGAGCGCGC134,291,375c21Separator000000000000000000000011010
163AATGCTATTTTGTGACTGCTA134,291,378w21Separator000000000000000000010010000
164TTGGCAAGAGAACATGGAGCG134,291,378c21Separator000000000000100001000000000
165TTTGGCAAGAGAACATGGAGC134,291,379c21Separator000200000000000000000000101
166ATTTGGCAAGAGAACATGGAG134,291,380c21Separator000010010000000000000000000
167CATTTGGCAAGAGAACATGGA134,291,381c21Separator000000000000000000000100100
168GCATTTGGCAAGAGAACATGG134,291,382c21Separator001000000000000000000001000
169ATTTTGTGACTGCTAAGTAAG134,291,384w21Separator000000000100000000000000000
170TAGCATTTGGCAAGAGAACAT134,291,384c21Separator000001000000000120000000000
171AATAGCATTTGGCAAGAGAAC134,291,386c21Separator010014000001020010000010100
172AAATAGCATTTGGCAAGAGAA134,291,387c21Separator000100000000000000000000000
173TTGTGACTGCTAAGTAAGATG134,291,387w21Separator000010000000000000000000000
174TGTGACTGCTAAGTAAGATGC134,291,388w21Separator000111001000010010000002011
175CAAAATAGCATTTGGCAAGAGAAC134,291,389c24Separator000010000000000000000000000
176GTGACTGCTAAGTAAGATG134,291,389w19Separator000000000000000000000001000
177GTGACTGCTAAGTAAGATGCT134,291,389w21Separator001006311000000000000130000
178GTGACTGCTAAGTAAGATGCTA134,291,389w22Separator001000000000000000000000000
179GTGACTGCTAAGTAAGATGCTAA134,291,389w23Separator000000000000011000000000000
180GTGACTGCTAAGTAAGATGCTAAT134,291,389w24Separator001261502000100022000200100
181ACAAAATAGCATTTGGCAAGAGAAC134,291,390c25Separator001000000000000000000000000
182TGACTGCTAAGTAAGATGCT134,291,390w20Separator000000000000000001000000000
183TGACTGCTAAGTAAGATGCTA134,291,390w21Separator301874511531086821180139721129
184TGACTGCTAAGTAAGATGCTAA134,291,390w22Separator000100000000000100000010000
185TGACTGCTAAGTAAGATGCTAATG134,291,390w24Separator000100000000000000000000000
186TCACAAAATAGCATTTGGCAA134,291,392c21Separator000000000000000001000000000
187AAGTAAGATGCTAATGCTACGGTG134,291,398w24Separator000000000000000001000000000
188TAGCAGTCACAAAATAGCATT134,291,398c21Separator000010000000000000000000000
189TACTTAGCAGTCACAAAATAG134,291,402c21Separator000000000000000000000010000
190TGCTAATGCTACGGTGCGGTT134,291,406w21Separator000000000000000000000001000
191CATCTTACTTAGCAGTCACAA134,291,407c21Separator001213021000121111000101322
192TAATGCTACGGTGCGGTTTAT134,291,409w21Separator000010010000000000000000000
193AATGCTACGGTGCGGTTTATCGGG134,291,410w24Separator001000100000101000000001010
194AATGCTACGGTGCGGTTTATCGGGA134,291,410w25Separator000000020000000001000000000
195CTACGGTGCGGTTTATCGGGA134,291,414w21Separator000100000000000000000000000
196GTAGCATTAGCATCTTACTTAGCA134,291,417c24Separator000000000000000010000000000
197CACCGTAGCATTAGCATCTTAC134,291,421c22Separator000000000000100000000000000
198TAAACCGCACCGTAGCATTAG134,291,428c21Separator0016168781421171012118701213101081017
199CGATAAACCGCACCGTAGCATTAG134,291,431c24Separator000000000000010000000000000
200GGGAAAATGTATGTTGTTTGA134,291,431w21Separator000000000000120100000000000
201ATGTATGTTGTTTGATAATAGAGC134,291,437w24Separator000010000000000000000000000



Number of unique reads retrieved on this page: 195