Rice small RNA Information



Reads existing in this region (Chr 1, 20,108,126 - 20,108,587):  1 - 91 of 91      


Page 1 of 1:    1    
#SequenceHitsCoordinateStrandLenSeparator1d_LT_s6_rep11d_LT_s6_rep21d_LT_s6_rep31d_LT_s8_rep11d_LT_s8_rep21d_LT_s8_rep31d_LT_s9_rep11d_LT_s9_rep21d_LT_s9_rep31d_NT_s6_rep11d_NT_s6_rep21d_NT_s6_rep31d_NT_s8_rep11d_NT_s8_rep21d_NT_s8_rep31d_NT_s9_rep11d_NT_s9_rep21d_NT_s9_rep3FLAG_1D_S6_1_inFLAG_1D_S6_2_inFLAG_1D_S6_3_inFLAG_1D_S6_1_RIPFLAG_1D_S6_2_RIPFLAG_1D_S6_3_RIPFLAG_1D_S8_1_inFLAG_1D_S8_2_inFLAG_1D_S8_3_inFLAG_1D_S8_1_RIPFLAG_1D_S8_2_RIPFLAG_1D_S8_3_RIPFLAG_1D_S9_1_inFLAG_1D_S9_2_inFLAG_1D_S9_3_inFLAG_1D_S9_1_RIPFLAG_1D_S9_2_RIPFLAG_1D_S9_3_RIPWT_LT_s6_rep1WT_LT_s6_rep2WT_LT_s6_rep3WT_LT_s8_rep1WT_LT_s8_rep2WT_LT_s8_rep3WT_LT_s9_rep1WT_LT_s9_rep2WT_LT_s9_rep3WT_NT_s6_rep1WT_NT_s6_rep2WT_NT_s6_rep3WT_NT_s8_rep1WT_NT_s8_rep2WT_NT_s8_rep3WT_NT_s9_rep1WT_NT_s9_rep2WT_NT_s9_rep3
Signature abundances normalized to (varies by library depth): Separator3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M
1TGATATAGTGGTATAATGGAA120,108,157w21Separator000000000000000000000000001000000000000000000000000000
2ATAGTGGTATAATGGAAATTT120,108,161w21Separator000000000000000000100000000000000000000000000000000000
3TAGTGGTATAATGGAAAT120,108,162w18Separator000000000000000000000000000200000000000000000000000000
4TAGTGGTATAATGGAAATT120,108,162w19Separator000000000000000000000000000100000203000000000000000000
5TAGTGGTATAATGGAAATTTC120,108,162w21Separator000000000000000000100131000104000420000000000000000000
6TGGTATAATGGAAATTTCTG120,108,165w20Separator000000000000000000000000100000000000000000000000000000
7TGGAAATTTCTGATAGATAAG120,108,173w21Separator000000000000000000100000000000000000000000000000000000
8AATTTCCATTATACCACTATA120,108,180c21Separator000000000000000000000000000000000000001000000000000000
9TTCTGATAGATAAGCACGGCTG120,108,180w22Separator000000000000000000100000000000000000000000000000000000
10TGATAGATAAGCACGGCT120,108,183w18Separator000000000000000000000000100000000000000000000000000000
11TGATAGATAAGCACGGCTG120,108,183w19Separator000000000000000000000000010003100000000000000000000000
12TGATAGATAAGCACGGCTGA120,108,183w20Separator000000000000000000111100100000000000000000000000000000
13TGATAGATAAGCACGGCTGAA120,108,183w21Separator000002000000000000310130001110001140210101110000010322
14ACGGCTGAAAGCGCTAAGAACAC120,108,195w23Separator000000000000000000100000000000000000000000000000000000
15CAGCCGTGCTTATCTATCAGA120,108,201c21Separator000000000000000000001000000000000000000000000000000000
16CAGCCGTGCTTATCTATCAGAAAT120,108,201c24Separator000000000000000000000000000000000000000000000000001000
17AAAGCGCTAAGAACACAACATAT120,108,202w23Separator000000000000000000100000000000000000000000000000000000
18AGCGCTAAGAACACAACAT120,108,204w19Separator000000000000000000100000100000000000000000000000000000
19AGCGCTAAGAACACAACATA120,108,204w20Separator000000000000000000010000000000000000000000000000000000
20AGCGCTAAGAACACAACATAT120,108,204w21Separator000000000000000000012000001000000000000000000000000000
21ATGTTGTGTTCTTAGCGCTT120,108,222c20Separator000000000000000000001000000000000000000000000000000000
22ATGTTGTGTTCTTAGCGCTTT120,108,222c21Separator000000000000000000113001100000000001000000000000000000
23ATGTTGTGTTCTTAGCGCTTTCAG120,108,222c24Separator000000000000000000001000000000000000000000000000000000
24TATATGCCTGTAGCTTATTTG120,108,224w21Separator000000000000000000000001000000000000000000000000000000
25ATATGCCTGTAGCTTATTTG120,108,225w20Separator000000000000000000102000000000000000000000000000000000
26ATATGCCTGTAGCTTATTTGA120,108,225w21Separator000000000000000000101100101021000000000000000001000000
27TATGCCTGTAGCTTATTTGAG120,108,226w21Separator000000000000000000000000000000100000000000000000000000
28TGAGCTGCTAGTATATATATGTTG120,108,243w24Separator000000000000000000001000000000000000000000000000000000
29TAGTATATATATGTTGGGCTC120,108,251w21Separator000000000000000000000000000100000000000000000000000000
30ATATATATGTTGGGCTCGGCC120,108,255w21Separator000000000000000000010000000000000000000000000000000000
31TATATGTTGGGCTCGGCCTGT120,108,258w21Separator000000000000000000000000000000000000000000000000020000
32TATATGTTGGGCTCGGCCTGTT120,108,258w22Separator000000000000000000100000000000000000000000000000000000
33ACATATATATACTAGCAGCTC120,108,264c21Separator000000000000000000001000000000000000000000000010000000
34CTCGGCCTGTTAATTAAACTG120,108,269w21Separator000000000000000000000000000000000000000000000010000000
35TTAACCATATAATTAAGCAGT120,108,306c21Separator000000000000000000000000000000000000000000010000000000
36TGGACTAATCAGCCGTTTTTGCGT120,108,327w24Separator000000000000000000000000100000000000000000000000000000
37GCAAAAACGGCTGATTAGTCC120,108,348c21Separator000000000000000000001000100000000000000000000000000000
38TCATGAAAAGGAAAACCATTC120,108,351w21Separator000000000000000000001000000000000000000000000000000000
39TCATGAACGCAAAAACGGCTG120,108,356c21Separator000000000000000000000000000000000000000001000000000000
40AGGAAAACCATTCTGAACTGC120,108,359w21Separator000000000000000000100000010000000000000000000000000000
41TGAACTGCATGTTCATGTG120,108,372w19Separator000000000000000000001000000000000000000000000000000000
42TGAACTGCATGTTCATGTGGG120,108,372w21Separator000000000000000000100000000000000000000000000000000000
43CATGTGGGTTTTTTTGTTGCTGAC120,108,385w24Separator000000000000000000000000000000001000000000000000000000
44TTTTTTTGTTGCTGACAC120,108,393w18Separator000000000000000000000000000000000100000000000000000000
45TTTTTTTGTTGCTGACACC120,108,393w19Separator000000000000000000000010000000000000000000000000000000
46TTTTTTTGTTGCTGACACCG120,108,393w20Separator000000000000000000001613101104100220000000000000200000
47TTTTTTTGTTGCTGACACCGA120,108,393w21Separator0000010000001000000115841111203001150248352120335102000
48TTTTTTGTTGCTGACACCGAAT120,108,394w22Separator000000000000000000000010000000000000000000000000000000
49TTTGTTGCTGACACCGAATAG120,108,397w21Separator000000000000000000000000000000000000000000100000000000
50TTTGTTGCTGACACCGAATAGT120,108,397w22Separator100000000000000000000000000000000000000000000000000000
51TGATGCGGCCGTCTTTTTGTA120,108,423w21Separator000000000000000000000000000000000000012000000010000000
52ATGCGGCCGTCTTTTTGTACAATG120,108,425w24Separator000000000000000000000000000000100000000000000000000000
53TGCGGCCGTCTTTTTGTACAA120,108,426w21Separator000000000000000000000000000000001000000000010030000000
54CTTTTTGTACAATGGTTCCA120,108,435w20Separator000000000000000000000000000100000000000000000000000000
55CTTTTTGTACAATGGTTCCAT120,108,435w21Separator000000000000000000001000000000000000000000000000000000
56TGAGCTGATGGAACCATTGTA120,108,462c21Separator000000000000000000000000000000000000000010000000000000
57TTGAGCTGATGGAACCATTGT120,108,463c21Separator000000000000000000100000000000000000000000000000000000
58GCATTAGGAATTTGAGCTGAT120,108,474c21Separator000000000000000000012000000000001000000000000000000000
59GCATTAGGAATTTGAGCTGATGGAACCATTGTAC120,108,474c34Separator000000000000000000000000000000000001000000000000000000
60TTGAGCTGCATTAGGAATTTGA120,108,481c22Separator000000000000000000000000000100000000000000000000000000
61TATGTCACGGGATTGAGCTGCATT120,108,493c24Separator000000000000000000000000000000000000000000000000010000
62AACGTTGAGATATGTCACGGGATTGAGC120,108,503c28Separator000000000000000000000001000000000000000000000000000000
63AACGGGTCGTGTGGATCTCAACGT120,108,522c24Separator000000000000000000000000000000000000000000010000000000
64ATTTATAATCGATTGCCTCTTAC120,108,531w23Separator000000000000000000000000100000000000000000000000000000
65TACATACTCACATCTTTCGTCG120,108,551w22Separator000000000000000000000000000000000000000000000000000020
66ACATACTCACATCTTTCGTCGGTC120,108,552w24Separator000000000000000000000000000000010000000000000000000000
67ATACTCACATCTTTCGTCGGT120,108,554w21Separator000000000000000000001000000000000000000000000000000000
68ATACTCACATCTTTCGTCGGTCGG120,108,554w24Separator000000000000000000000000000000000000000000000010000020
69ATACTCACATCTTTCGTCGGTCGGA120,108,554w25Separator000000000000000000000000000000000000000000000000000100
70ACTCACATCTTTCGTCGGTCGGAC120,108,556w24Separator000000000000000000000000100000000000000000000000000000
71CTCACATCTTTCGTCGGTCGGACG120,108,557w24Separator000000000000010000000000100000000000000000000000001000
72TCACATCTTTCGTCGGTCGGA120,108,558w21Separator000000000000000000000000010000000000000000000000000000
73TCACATCTTTCGTCGGTCGGACGA120,108,558w24Separator000000020000000001000000100000000000000100000000000000
74CACATCTTTCGTCGGTCGGACGA120,108,559w23Separator000000000000000000000000001000000000000000000000000000
75CACATCTTTCGTCGGTCGGACGAA120,108,559w24Separator000000000000000000012001111100000050000000000000000000
76ACATCTTTCGTCGGTCGG420,108,560w18Separator000000000000000000000000000000000000000000000001000000
77ACATCTTTCGTCGGTCGGACGAATT120,108,560w25Separator010000000000000000000000000000000000000000000000000000
78CATCTTTCGTCGGTCGGA620,108,561w18Separator000000000000000000100110000000010040000000000000000000
79CATCTTTCGTCGGTCGGACGAA220,108,561w22Separator000000000100000000000000110000001000000000000000000000
80CATCTTTCGTCGGTCGGACGAATT220,108,561w24Separator000000000000000000000000000000000100000000000000000000
81ATCTTTCGTCGGTCGGACGAA220,108,562w21Separator000000000000000000000000010000000000000000000000000000
82AAGATGTGAGTATGTAAGAG120,108,566c20Separator000000001000000000000000000000000000000000000000000000
83AAGATGTGAGTATGTAAGAGGCA120,108,566c23Separator000000000000000000000000000000010000000000000000000000
84AAAGATGTGAGTATGTAAGAGGC120,108,567c23Separator000000000000000000000000000000001000000000000000000000
85CGGTCGGACGAATTCCACAATAGT220,108,571w24Separator000000000000000000000000000000001000000000000000000000
86CCGACCGACGAAAGATGTG120,108,577c19Separator000000000000000000000000001000000000000000000000000000
87GACGAATTCCACAATAGTCCCGGT220,108,577w24Separator000000000001000000000000000000000000000000000000000000
88TCCGACCGACGAAAGATGTGAGT120,108,578c23Separator000000000000000000000000010000000000000000000000000000
89GAATTCCACAATAGTCCCGG8220,108,580w20Separator000000000000000000000000000000000000000000000000001000
90GAATTCCACAATAGTCCCGGT3720,108,580w21Separator000000000000000000000001000000000000000000000000000000
91AATTCCACAATAGTCCCGGTT11320,108,581w21Separator000000000000000000011020000000000001100000000000001000



Number of unique reads retrieved on this page: 81