Rice small RNA Information



Reads existing in this region (Chr 1, 20,403,446 - 20,403,867):  1 - 68 of 68      


Page 1 of 1:    1    
#SequenceHitsCoordinateStrandLenSeparator1d_LT_s6_rep11d_LT_s6_rep21d_LT_s6_rep31d_LT_s8_rep11d_LT_s8_rep21d_LT_s8_rep31d_LT_s9_rep11d_LT_s9_rep21d_LT_s9_rep31d_NT_s6_rep11d_NT_s6_rep21d_NT_s6_rep31d_NT_s8_rep11d_NT_s8_rep21d_NT_s8_rep31d_NT_s9_rep11d_NT_s9_rep21d_NT_s9_rep3FLAG_1D_S6_1_inFLAG_1D_S6_2_inFLAG_1D_S6_3_inFLAG_1D_S6_1_RIPFLAG_1D_S6_2_RIPFLAG_1D_S6_3_RIPFLAG_1D_S8_1_inFLAG_1D_S8_2_inFLAG_1D_S8_3_inFLAG_1D_S8_1_RIPFLAG_1D_S8_2_RIPFLAG_1D_S8_3_RIPFLAG_1D_S9_1_inFLAG_1D_S9_2_inFLAG_1D_S9_3_inFLAG_1D_S9_1_RIPFLAG_1D_S9_2_RIPFLAG_1D_S9_3_RIPWT_LT_s6_rep1WT_LT_s6_rep2WT_LT_s6_rep3WT_LT_s8_rep1WT_LT_s8_rep2WT_LT_s8_rep3WT_LT_s9_rep1WT_LT_s9_rep2WT_LT_s9_rep3WT_NT_s6_rep1WT_NT_s6_rep2WT_NT_s6_rep3WT_NT_s8_rep1WT_NT_s8_rep2WT_NT_s8_rep3WT_NT_s9_rep1WT_NT_s9_rep2WT_NT_s9_rep3
Signature abundances normalized to (varies by library depth): Separator3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M3M
1ATTTTTTTAATAAGACGAAT29720,403,446w20Separator000000000000000000000000000000010000000000000000000000
2TTTTTTTAATAAGACGAAT45020,403,447w19Separator000000000000000000100000001000100000000000000000000000
3TTTTTTTAATAAGACGAATGG31020,403,447w21Separator000000000000000000010000000000100000000000000000000000
4TTTTTTAATAAGACGAAT56620,403,448w18Separator000000000000000000001000000010011000000000000000000000
5TTTTTTAATAAGACGAATG48720,403,448w19Separator000000000000000000001000000000100000000000000000000000
6TTTTTTAATAAGACGAATGG38020,403,448w20Separator002000000000000000101000100000100000100000000000000000
7TTTTTTAATAAGACGAATGGT36920,403,448w21Separator000000100000000000000201000000301023000000030000000000
8TTTTTTAATAAGACGAATGGTC28920,403,448w22Separator000000000000000000100000000000000000000000000000000000
9TTTTTAATAAGACGAATG52420,403,449w18Separator000000000000000000000000001000000000000000000000000000
10TTTTTAATAAGACGAATGGT39520,403,449w20Separator000000000100000000000000001000000000000000000000000000
11TTTTTAATAAGACGAATGGTC30320,403,449w21Separator000000000000000000000000000000000001000000000000000000
12TTTTAATAAGACGAATGGTCAAAC24520,403,450w24Separator000000000000000000000000000000001000000000000000000000
13TTTAATAAGACGAATGGT41620,403,451w18Separator000000000000000000000000000200000100000000000000000000
14TTAATAAGACGAATGGTCAA30920,403,452w20Separator000000000000000000000000100000000000000000000000000000
15AATAAGACGAATGGTCAAAC1,78220,403,454w20Separator000000100000000000011000000110000001000000000000000000
16AATAAGACGAATGGTCAAACA1,38020,403,454w21Separator000010000000000000000000120000000000000000000000000000
17AATAAGACGAATGGTCAAACAT92620,403,454w22Separator000000000000000000000000011000010000000000000000000000
18AATAAGACGAATGGTCAAACATAT11220,403,454w24Separator000000000000000000000001000000000000000000000000000000
19ATAAGACGAATGGTCAAAC1,80620,403,455w19Separator010001000000000000101000100000100106000000000000000000
20ATAAGACGAATGGTCAAACA1,39220,403,455w20Separator010000000000000000100000100000000100000000000200000000
21ATAAGACGAATGGTCAAACAT93120,403,455w21Separator100000000000000000000000000000010000000000000000000000
22ATAAGACGAATGGTCAAACATATC220,403,455w24Separator000000000000000000000000000000000100000000000000000000
23TAAGACGAATGGTCAAACA1,41120,403,456w19Separator000000000000000000000100100000000000000000000010000000
24TAAGACGAATGGTCAAACAT94420,403,456w20Separator000000000000000000100000000000000000000000000000000000
25AAGACGAATGGTCAAACA1,42820,403,457w18Separator000000000000000000100000000000000000000000000000000000
26ATTCGTCTTATTAAAAAAATT24920,403,465c21Separator000000000000000000100000000000000000000000000000000000
27ATTCGTCTTATTAAAAAAATTA11020,403,465c22Separator000000000000000000000000000000001000000000000000000000
28CATTCGTCTTATTAAAAAA48720,403,466c19Separator000000000000000000000204000111000100010000000000000000
29CATTCGTCTTATTAAAAAAA39020,403,466c20Separator000000000000000000010101000000000001000000000000000000
30CATTCGTCTTATTAAAAAAAT25520,403,466c21Separator000000000000000000000001000000000000000000000000000000
31CATTCGTCTTATTAAAAAAATT21820,403,466c22Separator000000000000000000000100000000000000000000000000000000
32CATTCGTCTTATTAAAAAAATTA9720,403,466c23Separator000000000000000000001000000000000000000000000000000000
33CATTCGTCTTATTAAAAAAATTAT3220,403,466c24Separator000000000000002000000100000000000000000000000000000000
34CCATTCGTCTTATTAAAA42120,403,467c18Separator000000000000000000000000000000000100000000000000000000
35ACCATTCGTCTTATTAAAAAAA30220,403,468c22Separator000000000000000000000000000000000020000000000000000000
36ACCATTCGTCTTATTAAAAAAATT17620,403,468c24Separator000000000000000000000000010000000000000000000000000000
37TTGACCATTCGTCTTATT2,13320,403,471c18Separator000300000000000000000000000000000000000000000000000000
38TTTGACCATTCGTCTTATT2,09720,403,472c19Separator000000000000000000010000000000000000000000000000000000
39ATCTTTAAAAAAAGTTAATGGCGT120,403,476w24Separator000000000000000000000000000000010000000000000000000000
40TATGTTTGACCATTCGTCTT12620,403,476c20Separator000000000000000000000000000000010000000000000000000000
41ATATGTTTGACCATTCGTC12120,403,477c19Separator010000000000000000000000000000000000000000000000000000
42ATATGTTTGACCATTCGTCTTATT11220,403,477c24Separator000000000000000000000000000000100000000000000000000000
43TTTAAAAAAAGTTAATGGCGT320,403,479w21Separator000000000000000000000000100000000000002000000000000000
44TTTTTTAAAGATATGTTTGACC120,403,487c22Separator000000000000000000010000000000000000000000000000000000
45TATTAAAAAACGGAGAGA2420,403,504w18Separator000000000000000000000000000000100000000000000000000000
46TATTAAAAAACGGAGAGAGT2320,403,504w20Separator000000000000000000000000000001000000002000000000000000
47TATTAAAAAACGGAGAGAGTA2020,403,504w21Separator100000000000000000001001000000000000001000000001000020
48GGAAACTTGTTACTCTCTCCGTTT120,403,534c24Separator000000000000000000000000000000000000000000000000000100
49GAGGAAACTTGTTACTCTCTCCGT120,403,536c24Separator000000000000000000000000100000000000000000000000000000
50CCAATCTATACCGTACACGTA120,403,546w21Separator000000000000000000000000000000000000010000000000000000
51CGTGTACGGTATAGATTGGTT120,403,564c21Separator000000000000000000010000000000000000000000000000000000
52TTACCGTGTAGTTTTTCT120,403,585c18Separator000001000000000000000000000000000000000000000000000000
53TTACCGTGTAGTTTTTCTGT120,403,585c20Separator000000000000000000111000001000000000000000000000000000
54TTACCGTGTAGTTTTTCTGTA120,403,585c21Separator010011100011010000211001201000000100011001000000200000
55CAATCCTACTCGGCATGCC120,403,609w19Separator000000000000000000000000001000000000000000000000000000
56CAATCCTACTCGGCATGCCTG120,403,609w21Separator536603000212000010100010010003000000552212111333540020
57AATCCTACTCGGCATGCCTG120,403,610w20Separator000000000000000000000000000000000000000000000001000000
58CTTGATGGCTTGGAATATC120,403,651w19Separator000000000000000000000000000000001000000000000000000000
59CTTGATGGCTTGGAATATCT120,403,651w20Separator000000000000000000000000100000101000000000010000010000
60CTTGATGGCTTGGAATATCTA120,403,651w21Separator17172132556111205115013411100021110000000002025281311149118123109102400
61TTGATGGCTTGGAATATCTA120,403,652w20Separator010000000000000200000000000000000000000000000000000000
62TTCACGGAGTTGGGCCGCCAT120,403,711c21Separator000000000000000000000102000000000000000000000000002000
63ACAACAAGAGGCAGAGAAGCT120,403,732c21Separator000000000000200000000000000000000000000000000000000000
64CCGCAATGGCGTGTTTGCTCG120,403,735w21Separator000000000000000000010000000000000000000000000000000000
65TTTGCTCGCACCAACTGTTCCTG120,403,748w23Separator001000000000000000000000000000000000000000000000000000
66CACCAACTGTTCCTGATGT120,403,756w19Separator000000000000000000100000000000000000000000000000000000
67AAGACATCAGGAACAGTTGGTG120,403,777c22Separator000000000000000000000010000000000000000000000000000000
68GCTACACGAACGAGGAGCCTGATG120,403,851w24Separator010000000000000000000000000000000000000000000000000000



Number of unique reads retrieved on this page: 23