Rice small RNA Information



Reads existing in this region (Chr 1, 34,285,221 - 34,285,852):  1 - 167 of 167      


Page 1 of 1:    1    
#SequenceHitsCoordinateStrandLenSeparatorShCs1IShCs2NShSb1IShSb2NShSbNa1IShSbNa2NPCs1DPCs2DPSb1DPSb2DOSA238OSA239OSA240OSA241OSA242OSA243OSA244OSA245OSA246OSA247OSA248OSA249OSA250OSA251OSA252OSA253OSA254OSA255OSA256OSA257OSA258OSA259OSA260OSA261OSA262OSA263OSA264
Signature abundances normalized to (varies by library depth): Separator2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M
1AGAAGAAATACATGTCAC134,285,236w18Separator0000000000000100000000000000000000000
2GAAGAAATACATGTCACATCAGAG134,285,237w24Separator0000000000000000000000000000001000000
3AAGAAATACATGTCACATCAGAGT134,285,238w24Separator0000000000000000001000000000000000000
4TCACATCAGAGTGACGTACTC134,285,250w21Separator0000000000001000000000000000000000000
5TCACATCAGAGTGACGTACTCCCT134,285,250w24Separator0000000000000000100000000000000000000
6CACATCAGAGTGACGTACTCCCTC134,285,251w24Separator0000001000000000000000000000000000000
7ACATCAGAGTGACGTACTCCCT134,285,252w22Separator0000000000000000000000100000000000000
8ATCAGAGTGACGTACTCCCTCC134,285,254w22Separator0000000000000000000000100000000000000
9TCTGATGTGACATGTATTTCTTCT134,285,259c24Separator0000000000001000000000000000000000000
10ACTCTGATGTGACATGTATTTCT134,285,261c23Separator0000000000000000000000000000000010000
11ACTCCCTCCGTCCAAAAA42134,285,267w18Separator0000000000010000000000000000000000000
12ACTCCCTCCGTCCAAAAAA38434,285,267w19Separator0000000000000000000010000000000000000
13CCCTCCGTCCAAAAAAAA32134,285,270w18Separator0000000000000000000000000000100000000
14CTCCGTCCAAAAAAAACAACCT134,285,272w22Separator0000000000000000000000010000000000000
15GGGAGTACGTCACTCTGATGTGAC134,285,272c24Separator0000000000000000000000000000100000000
16AGGGAGTACGTCACTCTGA134,285,273c19Separator0000000000000010000000000000000000000
17GAGGGAGTACGTCACTCTGA134,285,274c20Separator0000000000000000000000000000000010000
18ACGGAGGGAGTACGTCACT134,285,277c19Separator0000000010000000000000000000000000000
19ACGGAGGGAGTACGTCACTCTGA134,285,277c23Separator0000000000000000000000000000100000000
20ACGGAGGGAGTACGTCACTCTGAT134,285,277c24Separator0000000000000000000000000000000010000
21GGACGGAGGGAGTACGTCACTC134,285,279c22Separator0000000000000000000000000000000010000
22GGACGGAGGGAGTACGTCACTCTG134,285,279c24Separator0000000100000000000000000000000000000
23TGGACGGAGGGAGTACGTCACTC134,285,280c23Separator0000000000000000000000000000000000001
24TTGGACGGAGGGAGTACGT2334,285,281c19Separator0000000001000000000000000000000000000
25TTGGACGGAGGGAGTACGTCA334,285,281c21Separator0010000000000000000000000000000000000
26TTGGACGGAGGGAGTACGTCACTC134,285,281c24Separator0000001100000000000000000000000000001
27TTTGGACGGAGGGAGTAC13234,285,282c18Separator0000000000000000000000100000000000001
28TTTGGACGGAGGGAGTACGTCA334,285,282c22Separator0000001000000000000000000000000000000
29TTTGGACGGAGGGAGTACGTCACT134,285,282c24Separator0000000000000000100100000000000000000
30TTTTGGACGGAGGGAGTA43934,285,283c18Separator0000000000000001001000000000000000000
31TTTTGGACGGAGGGAGTAC12934,285,283c19Separator0000000000100010000000000000000000000
32TTTTGGACGGAGGGAGTACG3334,285,283c20Separator0000000000000010000000000000000000000
33TTTTGGACGGAGGGAGTACGT2234,285,283c21Separator0000000000000001000000000000000000000
34TTTTGGACGGAGGGAGTACGTC634,285,283c22Separator0000000000000000001000000000000000000
35TTTTGGACGGAGGGAGTACGTCAC334,285,283c24Separator0000010000000000000000000000000000000
36TTTTGGACGGAGGGAGTACGTCACT134,285,283c25Separator0000000000001000000000000000000000000
37TTTTTGGACGGAGGGAGT42134,285,284c18Separator0100000000111111110010000101001010000
38TTTTTGGACGGAGGGAGTA41034,285,284c19Separator0000000000100001000000110000000000010
39TTTTTGGACGGAGGGAGTAC12134,285,284c20Separator0000000000100000000000000001000000000
40TTTTTGGACGGAGGGAGTACGT2134,285,284c22Separator0000000100000000000000000000000000000
41TTTTTTGGACGGAGGGAG40034,285,285c18Separator0000000000000000000000010000000000000
42TTTTTTGGACGGAGGGAGT38434,285,285c19Separator0000000000110120010110100000101001001
43TTTTTTGGACGGAGGGAGTA37434,285,285c20Separator0000000000000000000100000000000000000
44TTTTTTGGACGGAGGGAGTACGTC634,285,285c24Separator0000000000000000000000000000000000001
45TTTTTTTGGACGGAGGGAGT36534,285,286c20Separator0000000000100101100101110100101111000
46TTTTTTTGGACGGAGGGAGTA35534,285,286c21Separator0000000000000001000111000110000010000
47TTTTTTTGGACGGAGGGAGTACGT1534,285,286c24Separator0100000000100000000000000000000000000
48TTTTTTTTGGACGGAGGGA30034,285,287c19Separator0001000000000000000000000000000000000
49TTTTTTTTGGACGGAGGGAG28034,285,287c20Separator0000000000000000000000000100000000000
50TTTTTTTTGGACGGAGGGAGT27034,285,287c21Separator0000000000000100000011110000000000001
51TTTTTTTTGGACGGAGGGAGTA26134,285,287c22Separator0000000000001000000000000000000000000
52TTTTTTTTGGACGGAGGGAGTAC7234,285,287c23Separator0000000000000000000010000000000000000
53GTTTTTTTTGGACGGAGGGAG4534,285,288c21Separator0000000000000000000000100000000000000
54GTTTTTTTTGGACGGAGGGAGT4434,285,288c22Separator0000000000000000000000010000000000000
55GTTTTTTTTGGACGGAGGGAGTA4434,285,288c23Separator0010000000000000000001000000000000000
56GTTTTTTTTGGACGGAGGGAGTAC934,285,288c24Separator0000000100000000010000000000000000000
57TGTTTTTTTTGGACGGAGGGAGT934,285,289c23Separator0100000000000000000000000000000000000
58TTGTTTTTTTTGGACGGAGGGAGT834,285,290c24Separator0000000000100000000000000000000000000
59CCTAGGTGGTGTAACGAATAAGGT134,285,291w24Separator0001000000000000000000000000000000000
60GTTGTTTTTTTTGGACGGAGGGAG134,285,291c24Separator0000000100000000000000000000000000000
61AGGTTGTTTTTTTTGGACGGAGGG134,285,293c24Separator0000001100000000000000000000000000000
62CACCTAGGTTGTTTTTTTTGGACG134,285,298c24Separator0000000000000000000000000000001000000
63GGTGTAACGAATAAGGTTGTCCAG134,285,298w24Separator0000000000000000000000000000000000100
64CCACCTAGGTTGTTTTTTTTGGACGG134,285,299c26Separator0000000000000000000000100000000000000
65GTAACGAATAAGGTTGTCCAGATT134,285,301w24Separator0000000000000001000000000000100000000
66TAACGAATAAGGTTGTCCAGATT134,285,302w23Separator0000000000000000100000000000000000000
67AACGAATAAGGTTGTCCAGAT134,285,303w21Separator0010000000000000000000000000000000000
68AACGAATAAGGTTGTCCAGATT134,285,303w22Separator0000000000000001000100000000000000000
69AACGAATAAGGTTGTCCAGATTCA134,285,303w24Separator0000000100000000000000000000000000000
70ACGAATAAGGTTGTCCAGATTCAT134,285,304w24Separator1000000000000000000000000100000000000
71AATAAGGTTGTCCAGATTCATTATT134,285,307w25Separator0000000000000000000010000000000000000
72ACCTTATTCGTTACACCACCTAGG134,285,314c24Separator0000000000001000000000000000000000100
73TGTCCAGATTCATTATTATAGGTG134,285,315w24Separator0000000000000000000100000000000000000
74TCCAGATTCATTATTATAGGTGAT134,285,317w24Separator0000000000000000000000000000100000000
75CTGGACAACCTTATTCGTTACACC134,285,321c24Separator0000000000001000100000000110100000000
76TCTGGACAACCTTATTCGTTACACC134,285,322c25Separator0000000000000000000000000100100000000
77AATGAATCTGGACAACCTTA134,285,328c20Separator0000000000000000010000000000000000000
78AATGAATCTGGACAACCTTATTCG134,285,328c24Separator0000000100000000000000000000000000000
79TAATGAATCTGGACAACCT134,285,329c19Separator0000000000000000000000000000100000000
80ATAATGAATCTGGACAACCTT134,285,330c21Separator0000000000000000000000100000000000000
81AATAATGAATCTGGACAACCT134,285,331c21Separator0000000000000000000000000100000000000
82AATAATGAATCTGGACAACCTTAT134,285,331c24Separator0000000000000000000000000000000000100
83ATAGGTGATATCAAATTCCCACCT134,285,332w24Separator0000000001000000000000000000000000000
84TAATAATGAATCTGGACAAC134,285,332c20Separator0000000000000100000000000000000000000
85ATAATAATGAATCTGGACAACCT134,285,333c23Separator0000000000000000001000000000000000000
86TATAATAATGAATCTGGACAACC134,285,334c23Separator0000000000001000000000000000000000000
87TATAATAATGAATCTGGACAACCT134,285,334c24Separator0000000000000000000100000100001000000
88CTATAATAATGAATCTGGACAACC134,285,335c24Separator0000000000100000000000000000000000000
89AATTCCCACCTATTTTGTCTATTT134,285,345w24Separator0010000000000000000000000000000000000
90TTTTGAAAAGGAGGGAGT434,285,366w18Separator0000000000000000000000000000000000001
91AGGAGGGAGTAGGCAAGTAGGGA134,285,374w23Separator0000000000010000000000000000000000000
92AGGGAGTAGGCAAGTAGGGAAT134,285,377w22Separator0000000010000000000000000000000000000
93GGGAGTAGGCAAGTAGGGAATGG134,285,378w23Separator0000001001000000000000000000000000000
94AGGCAAGTAGGGAATGGGAAGCGT134,285,384w24Separator0000000000001000000000000000000000000
95GTAGGGAATGGGAAGCGTTTGGGA134,285,390w24Separator0000000001000000000000000000000000000
96TAGGGAATGGGAAGCGTTTGG134,285,391w21Separator0000000000000000000000000000000000001
97AGGGAATGGGAAGCGTTTGGGAAG134,285,392w24Separator0001000000000000000000000000000000000
98AGCGTTTGGGAAGTTGAACAGGTC134,285,403w24Separator0000000000000000000000000001000000000
99GGGAAGTTGAACAGGTCTAGTGAC134,285,410w24Separator0000000000100000000001000110100000000
100AGTTGAACAGGTCTAGTGACGTCC134,285,414w24Separator0000000000000000010000000000000000000
101GTTGAACAGGTCTAGTGACGTC134,285,415w22Separator0000000000000000000000000000000100000
102GTTGAACAGGTCTAGTGACGTCC134,285,415w23Separator0000000000000100000000003000000000000
103TTGAACAGGTCTAGTGACGTCC134,285,416w22Separator0000000000000000010000000000000000000
104TGAACAGGTCTAGTGACGTCC134,285,417w21Separator0000000000000000000000000100000000000
105GAACAGGTCTAGTGACGTCC134,285,418w20Separator0000000000000000000000010000000000000
106TCTAGTGACGTCCTGGTTGCA134,285,425w21Separator0000001001000000000000000000000000000
107TAGTGACGTCCTGGTTGCATG134,285,427w21Separator0000000001000000000000000000000000000
108AACCAGGACGTCACTAGACCTGTT134,285,442c24Separator0000000000100000000000000000000000000
109ATGCAACCAGGACGTCACTAGACC134,285,446c24Separator0000000000000000010100000000100000000
110TGTGTTTGCTTGAAGTTACAC134,285,446w21Separator0000000100000000000000000000000000000
111CATGCAACCAGGACGTCACTAGAC134,285,447c24Separator0000000000000000001000000000001000000
112ACATGCAACCAGGACGTCACTAGAC134,285,448c25Separator0000000000000000000001000000000000000
113CACATGCAACCAGGACGTCAC134,285,449c21Separator0000000000000000000000000000000010000
114CAAGCAAACACATGCAACCAGGAC134,285,457c24Separator0000000000000000000000000100000000000
115ACATTCACCCGTCAGTTGCTA134,285,467w21Separator0000000001000000000000000000000000000
116ATTCACCCGTCAGTTGCTATTGTC134,285,469w24Separator0000000000001000000000000000000000000
117GGGTGAATGTGTGTAACTTCAAGC134,285,476c24Separator0000000010000000000000000000000000000
118GTTGCTATTGTCATTGATGTGGCT134,285,481w24Separator0000000000000000100000000000000000000
119GCTATTGTCATTGATGTGGCTGTC134,285,484w24Separator0000000000000000000100000000000000000
120GCAACTGACGGGTGAATGTGT134,285,485c21Separator0000001110000000000000000000000000000
121TCATTGATGTGGCTGTCA134,285,491w18Separator0000000000000000000000000000000000010
122TGACAATAGCAACTGACGGGT134,285,493c21Separator0000000100000000000000000000000000000
123ATGACAATAGCAACTGACGGGTG134,285,494c23Separator0000010000000000000000000000000000000
124AATGACAATAGCAACTGACGGGT134,285,495c23Separator0000000001000000000000000000000000000
125CAATGACAATAGCAACTGACGGGT134,285,496c24Separator0100000100000000000001000000000000000
126TCAATGACAATAGCAACTGAC134,285,497c21Separator0000000011000000000000000000000000000
127ATCAATGACAATAGCAACTGACGG134,285,498c24Separator0000001100000000000000000000000000000
128GTGGCTGTCACGATTGGTAGGAAC134,285,499w24Separator0000000000000000100000000000000000000
129GTGGCTGTCACGATTGGTAGGAACT134,285,499w25Separator0000000000000000001000000000000000000
130GGCTGTCACGATTGGTAGGAA134,285,501w21Separator0000000100000000000000000000000000000
131GATTGGTAGGAACTAGGAAGGGAAT134,285,510w25Separator0000001000000000000000000000000000000
132TAGGAACTAGGAAGGGAATGGG134,285,516w22Separator0000000000000001000000000000000000000
133TTCCTAGTTCCTACCAATCGTGAC134,285,528c24Separator0000000000000000000010000000000000000
134TCTTGTCTAATGGAGGAAGAGCGG134,285,548w24Separator0000001000000000000000000000000000000
135CTTGTCTAATGGAGGAAGAGCGGG134,285,549w24Separator0000000100000000000000000000000000000
136TGTCTAATGGAGGAAGAGCGG134,285,551w21Separator0000001151000000000000000000000000000
137GTCTAATGGAGGAAGAGCGG134,285,552w20Separator0000000001000000000000000000000000000
138AATGGAGGAAGAGCGGGGCTC134,285,556w21Separator0000000000100000000000000000000000000
139CTAGGCTAGCGAGAATACCTC134,285,611c21Separator0000000111000000000000000000000000000
140GCAATGTTGCTCCAAAACTACACT134,285,615w24Separator0000000000000000001000000000000000000
141CAGTGTAGTTTTGGAGCAACATT134,285,639c23Separator0000000000000000000000000000000000010
142ATGCGTGTGTATAATGCCTGCAGA134,285,641w24Separator0010000101000000000000000000000000000
143GTGTGTATAATGCCTGCAGA134,285,645w20Separator0000000001000000000000000000000000000
144ATAATGCCTGCAGAGATTCAAGAA134,285,651w24Separator0000000000000000001000000100000000000
145TAATGCCTGCAGAGATTCAAGAAA134,285,652w24Separator0000000000000000000000000000010000000
146AATGCCTGCAGAGATTCAAGAAAA134,285,653w24Separator0000000100000000000000000000000000000
147TATACACACGCATGCAGTGTA134,285,653c21Separator0000001100000000000000000000000000000
148CTGCAGAGATTCAAGAAAAGACAT134,285,658w24Separator0000000000000000000000000100000000000
149TCTCTGCAGGCATTATACACA134,285,666c21Separator0000001000000000000000000000000000000
150AATCTCTGCAGGCATTATACACAC134,285,668c24Separator0000000011000000000000000000000000000
151GAATCTCTGCAGGCATTATACACA134,285,669c24Separator0000001100000000000000000000000000000
152TGAATCTCTGCAGGCATTATACAC134,285,670c24Separator0100000100000000000000000000000000000
153CTTGAATCTCTGCAGGCATTATAC134,285,672c24Separator0000010000000000000000000000000000000
154TCTTGAATCTCTGCAGGCA134,285,673c19Separator0000000100000000000000000000000000000
155TCTTGAATCTCTGCAGGCAT134,285,673c20Separator0000001000000000000000000000000000000
156TCTTGAATCTCTGCAGGCATT134,285,673c21Separator0000001000000000000000000000000000000
157TTCTTGAATCTCTGCAGGCAT134,285,674c21Separator000000144147000000000000000000000000000
158TTCTTGAATCTCTGCAGGCATT134,285,674c22Separator0000000010000000000000000000000000000
159TTTCTTGAATCTCTGCAGGCA134,285,675c21Separator0000001111000000000000000000000000000
160TTTCTTGAATCTCTGCAGGCAT134,285,675c22Separator0000001101000000000000000000000000000
161GACATAAACAGATCAACTATTTGAC134,285,677w25Separator0000000000000000000000000010000000000
162AACAGATCAACTATTTGACTTGAC134,285,683w24Separator0000000000100000000000000000000000000
163ACTATTTGACTTGACGTTGCT134,285,692w21Separator0000000000000100000000000000000000000
164AGGAACAAATAGCAACGTCAAGTC134,285,722c24Separator0000000100000000000000000000000000000
165TCTCCAATAAGTTGAGTAGAG134,285,771w21Separator0000000100000000000000000000000000000
166AACCAAACTTGATGAAACTCATACT134,285,797w25Separator0000000000000000000000000001000000000
167GAAGGACTAAACAAGAACCGAGGT134,285,849w24Separator0000000000000000000000000000001000000



Number of unique reads retrieved on this page: 131