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Arabidopsis small RNA Control Panel - at_sRNA (small RNA)
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Select small RNA display options
Select small RNA sizes to display:
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Select small RNA libraries
You can move libraries between "Not Selected" and "Selected" by highlighting one or more libraries and then clicking on the right/left arrow. Note: If you select no libraries, all the libraries are displayed by default.
Not Selected
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Selected
Not Selected libraries
Selected libraries
Col0 (Col-0 wildtype, control for Ecker libraries (met1, rdd, ddc libraries); unopened, immature flower buds)
ddc (drm1-2 drm2-2 cmt3-11 triple mutant plants in a Col-0 background; unopened, immature flower buds)
met1 (met1-3 mutant plants in a Col-0 background; unopened, immature flower buds)
rdd (ros1-3 dml2-1 dml3-1 triple mutant plants in a Col-0 background; unopened, immature flower buds)
Col0b (Col-0 wildtype, control for Ecker libraries (abh1, ein5, ein5/abh1 libraries); unopened, immature flower buds)
abh11 (abh1-1 mutant plants in a Col-0 background; unopened, immature flower buds)
ein56 (ein5-6 mutant plants in a Col-0 background; unopened, immature flower buds)
ein56abh11 (ein5-6/abh1-1 mutant plants in a Col-0 background; unopened, immature flower buds)
SUr2a (Arabidopsis untreated rdr2 flowers - replicated run "a")
SUr2b (Arabidopsis untreated rdr2 flowers - replicated run "b")
SWT1 (Arabidopsis untreated wt flowers)
S234a (Arabidopsis untreated flowers, triple mutant dcl234 - replicated run "a")
S234b (Arabidopsis untreated dcl234 flowers - replicated run "b")
RMMT49 (Col-0 inflorescence; Slotkin et al., 2009)
RMKS02 (ddm1 inflorescence in Col-0 background; Slotkin et al., 2009)
RMKS01 (Col-0 pollen cells; Slotkin et al., 2009)
RMKS03 (Col-0 sperm cells; Slotkin et al., 2009)
RMMT10 (Col-0 callus; Tanurdzic et al., 2008)
RMMT11 (Col-0 cultured cells at 4 days; Tanurdzic et al., 2008)
RMMT05 (A. arenosa leaves)
RMMT12 (A. arenosa inflorescence)
MTSRNA2 (Col-0 cultured cells at 7 days; Tanurdzic et al., 2008)
MTSRNA1 (Col-0, leaf; Tanurdzic et al., 2008)
CxC5d (Siliques, 5 days after pollination; Col x Col, F1 hybrid. Mosher et al., 2009)
CxL5d (Siliques, 5 days after pollination; Col x Ler, F1 hybrid. Mosher et al., 2009)
LxL5d (Siliques, 5 days after pollination; Ler x Ler, F1 hybrid. Mosher et al., 2009)
LxC5d (Siliques, 5 days after pollination; Ler x Col, F1 hybrid. Mosher et al., 2009)
Cola (135 Col-0 flowers (stage 12) none 1)
Colb (136 Col-0 flowers (stage 12) none 2)
Colc (137 Col-0 flowers (stage 12) none 3)
ago1a (138 ago1-25 flowers (stage 12) none 1)
ago1b (139 ago1-25 flowers (stage 12) none 2)
ago1c (140 ago1-25 flowers (stage 12) none 3)
Col7a (141 Col-0 whole-aerial mock 7dpi 1)
Col7b (142 Col-0 whole-aerial mock 7dpi 2)
Col7c (143 Col-0 whole-aerial mock 7dpi 3)
Col10a (155 Col-0 whole-aerial mock 10dpi 1)
Col10b (156 Col-0 whole-aerial mock 10dpi 2)
Col10c (157 Col-0 whole-aerial mock 10dpi 3)
dcl17a (161 dcl1-7 whole-aerial mock 7dpi 1)
dcl110a (165 dcl1-7 whole-aerial mock 10dpi 1)
dcl2347a (169 dcl234 whole-aerial mock 7dpi 1)
dcl23410a (173 dcl234 whole-aerial mock 10dpi 1)
dcl17b (162 dcl1-7 whole-aerial mock 7dpi 2)
dcl17c (163 dcl1-7 whole-aerial mock 7dpi 3)
dcl110b (179 dcl1-7 whole-aerial mock 10dpi 2)
dcl110c (180 dcl1-7 whole-aerial mock 10dpi 3)
dcl2347b (181 dcl234 whole-aerial mock 7dpi 2)
Col7d (182 Col-0 whole-aerial mock 7dpi 4)
dcl23410b (183 dcl234 whole-aerial mock 10dpi 2)
dcl23410c (184 dcl234 whole-aerial mock 10dpi 3)
TuMV7dpiA (Col0 TumV treated 7dpi Replicate 1 w/o TumV tags)
TuMV7dpiB (Col0 TumV treated 7dpi Replicate 2 w/o TuMV tags)
TuMV7dpiC (Col0 TumV treated 7dpi Replicate 3 w/o TuMV tags)
TuMV10dpiA (Col0 TumV treated 10dpi Replicate 1 w/o TuMV tags)
TuMV10dpiB (Col0 TumV treated 10dpi Replicate 2 w/o TuMV tags)
TuMV10dpiC (Col0 TumV treated 10dpi Replicate 3 w/o TuMV tags)
Vector_IP (Vector control for AGO IP data, from Col-0 mixed-stage inflorescence)
AGO1_DDH_IP (AGO IP data for DDH mutant, Arabidopsis mixed-stage inflorescence)
AGO1_DAH_IP (AGO IP data for DAH mutant, Arabidopsis mixed-stage inflorescence)
Col_1 ("Col rep1" in Lee et al. (2012) Inflorescence of Arabidopsis Columbia (Col-0) plants, replication 1)
Col_2 ("Col rep2" in Lee et al. (2012) Inflorescence of Arabidopsis Columbia (Col-0) plants, replication 2)
Col_3 ("Col rep3" in Lee et al. (2012) Inflorescence of Arabidopsis Columbia (Col-0) plants, replication 3)
nrpe_1 ("nrpe rep1" in Lee et al. (2012) Inflorescence of Arabidopsis nrpd1b-11 mutant, replication 1)
nrpe_2 ("nrpe rep2" in Lee et al. (2012) Inflorescence of Arabidopsis nrpd1b-11 mutant, replication 2)
nrpe_3 ("nrpe rep3" in Lee et al. (2012) Inflorescence of Arabidopsis nrpd1b-11 mutant, replication 3)
FRDR2a (rdr2-1 library in Lee et al. (2012) Inflorescence of Arabidopsis rdr2-1 mutant)
pd1_b (nrpd1 library in Lee et al. (2012) Inflorescence of Arabidopsis nrpd1a-4 mutant)
edt (Wt(T+S) control in Lee et al. (2012) Inflorescence of Arabidopsis transgenic line containing target+silencer)
dms4 ("dms4-1" library in Lee et al. (2012) Inflorescence of Arabidopsis EMS mutant dms4-1)
AtD1 (drd1-1 library in Lee et al. (2012) Inflorescence of Arabidopsis EMS mutant drd1-1)
AtS3 (dms3-1 library in Lee et al. (2012) Inflorescence of Arabidopsis EMS mutant dms3-1)
AtS7 (rdm1-4 library in Lee et al. (2012) Inflorescence of Arabidopsis mutant rdm1-4)
Ath_ovule (wild type ovules of Arabidopsis)
ZhuSaltA (Salt stress library, shoots, stress: 300mM NaCl for 5 hours, 10-day-old plants)
ZhuSaltB (Col-0, shoots, stress: 300mM NaCl for 5 hours, 10-day-old plants)
FAta (control for rdr2 library in Lee et al. (2012), from inflorescence of Arabidopsis Columbia (Col-0) plants)
hen1_1b (Biological replicate, hen1-1 mutant, Ler background, inflorescence)
hen1_8_bcm (hen1-8 mutant, Col background, inflorescence)
Ler_b (Biological replicate, Landsberg erecta (Ler), wildtype, control for hen1-1b, inflorescence.)
Control_hen1 (small RNAs from AGO1 IP in hen1-8 and heso1-1/hen1-8, together with the input controls)
Control_hen1heso (small RNAs from AGO1 IP in hen1-8 and heso1-1/hen1-8, together with the input controls)
AGO1IP_hen1 (small RNAs from AGO1 IP in hen1-8 and heso1-1/hen1-8, together with the input controls)
AGO1IP_hen1heso1 (small RNAs from AGO1 IP in hen1-8 and heso1-1/hen1-8, together with the input controls)
hen1_2 (hen1-2)
ago1_11 (ago1-11)
wt_4_ago1 (wt_4_ago1)
hen1_ago1_db (hen1_ago1_db)
JZ_Ler_rep1 (Arabidopsis Ler wildtype, control for hen1-1 rep1)
JZ_Ler_rep2 (Arabidopsis Ler wildtype, control for hen1-1 rep2)
JZ_Ler_rep3 (Arabidopsis Ler wildtype, control for hen1-1 rep3)
JZ_hen1_1_rep1 (Arabidopsis hen1-1 mutant rep1)
JZ_hen1_1_rep2 (Arabidopsis hen1-1 mutant rep2)
JZ_hen1_1_rep3 (Arabidopsis hen1-1 mutant rep3)
JZ_Col_rep1 (Arabidopsis Col wildtype, control for hen1-8 rep1)
JZ_Col_rep2 (Arabidopsis Col wildtype, control for hen1-8 rep2)
JZ_Col_rep3 (Arabidopsis Col wildtype, control for hen1-8 rep3)
JZ_hen1_8_rep1 (Arabidopsis hen1-8 mutant rep1)
JZ_hen1_8_rep2 (Arabidopsis hen1-8 mutant rep2)
JZ_hen1_8_rep3 (Arabidopsis hen1-8 mutant rep3)
Total number of libraries you have selected: 100 out of 100 (this won't change until you press the "Submit" button)
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