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Rice small RNA Control Panel - rice_sRNA2 (small RNA)
Please make your selections and press "Submit".
Select display options (for "Gene/IGR Analysis" page)
Abundance view:
Sums of abundances
Sums of hits-normalized-abundance
Individual abundances
Color small RNA sequences by size:
Yes
No
Show K-mers:
Yes
No
Select small RNA display options
Select small RNA sizes to display:
<=20
21
22
23
24
>=25
Phasing analysis enabled:
Yes
No
Each phasing cycle's length:
19
20
21
22
23
24
25
Strand(s) to show phasing windows:
Both strands (each window on its original strand -- the default view)
Top-strand only (bottom-strand windows converted to top-strand)
Bottom-strand only (top-strand windows converted to bottom-strand)
Top and bottom strands together (all windows on each strand)
Optional: Highlight all positions exceeding defined score (0 - 100) >=
Select small RNA libraries
You can move libraries between "Not Selected" and "Selected" by highlighting one or more libraries and then clicking on the right/left arrow. Note: If you select no libraries, all the libraries are displayed by default.
Not Selected
Visual marker
Selected
Not Selected libraries
Selected libraries
SC1I (seedling, control #1)
SC2I (seedling, control #2)
SC3D (seedling, control #3)
SD1I (seedling, drought #1)
SD2D (seedling, drought #2)
SNa1I (seedling, salt #1)
SNa2D (seedling, salt #2)
SCd1I (seedling, cold#1)
SCd2D (seedling, cold#2)
SHt1I (seedling, heat #1)
SCdNa1I (seedling, cold + salt #1)
SHtD1I (seedling, heat + drought #1)
SHtNa1I (seedling, heat + salt #1)
S1dc1I (seedling, OsDCL1 RNAi #1-1)
S1dc1D (seedling, OsDCL1 RNAi #1-2)
S2dc1I (seedling, OsDCL1 RNAi #2-1)
S2dc1D (seedling, OsDCL1 RNAi #2-2)
RCn1I (root, control for nutrient starvation #1)
RCn2D (root, control for nutrient starvation #2)
RP1I (root, - P #1)
RP2D (root, - P #2)
RS1I (root, - S #1)
RS2D (root, - S #2)
RN1I (root, - N #1)
RN2D (root, - N #2)
RK1I (root, - K #1)
RK2D (root, - K #2)
RKNa1I (root, - K + salt#1)
RKNa2D (root, - K + salt#2)
RD1I (root, drought#1)
RD2D (root, drought#2)
ShCn1I (shoot, control for nutrient starvation #1)
ShCn2D (shoot, control for nutrient starvation #2)
ShP1I (shoot, - P #1)
ShP2D (shoot, - P #2)
ShS1I (shoot, - S #1)
ShS2D (shoot, - S #2)
ShN1I (shoot, - N #1)
ShN2D (shoot, - N #2)
ShK1I (shoot, - K #1)
ShK2D (shoot, - K #2)
ShKNa1I (shoot, - K + salt#1)
ShKNa2D (shoot, - K + salt#2)
PC1I (panicle, control #1-1)
PC1C (panicle, control #1-2)
PC2C (panicle, control #2)
PD1I (panicle, drought #1-1)
PD1C (panicle, drought #1-2)
PD2C (panicle, drought #2)
PNa1I (panicle, salt #1-1)
PNa1C (panicle, salt #1-2)
PNa2C (panicle, salt #2)
PCd1I (panicle, cold #1)
PCd2D (panicle, cold #2)
PHt1I (panicle, heat#1)
PCdNa1I (panicle, cold + salt #1)
PHtD1I (panicle, heat + drought #1)
PHtNa1I (panicle, heat + salt #1)
P1dc1I (panicle, OsDCL1 RNAi #1-1)
P1dc1D (panicle, OsDCL1 RNAi #1-2)
P2dc1I (panicle, OsDCL1 RNAi #2-1)
P2dc1D (panicle, OsDCL1 RNAi #2-2)
rbq (Young inflorescence enclosed in sheaths, from Nipponbare)
Total number of libraries you have selected: 63 out of 63 (this won't change until you press the "Submit" button)
Open other sites in the same browser tab/window
Yes
No
Set the cookie(s) to expire
On closure of browser
After 7 days
After 30 days (default)
After 365 days
Please press the "Submit" button to finalize your selection.