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Rice small RNA Control Panel - rice_sRNA3 (small RNA)
Please make your selections and press "Submit".
Select display options (for "Gene/IGR Analysis" page)
Abundance view:
Sums of abundances
Sums of hits-normalized-abundance
Individual abundances
Color small RNA sequences by size:
Yes
No
Show K-mers:
Yes
No
Select small RNA display options
Select small RNA sizes to display:
<=20
21
22
23
24
>=25
Phasing analysis enabled:
Yes
No
Each phasing cycle's length:
19
20
21
22
23
24
25
Strand(s) to show phasing windows:
Both strands (each window on its original strand -- the default view)
Top-strand only (bottom-strand windows converted to top-strand)
Bottom-strand only (top-strand windows converted to bottom-strand)
Top and bottom strands together (all windows on each strand)
Optional: Highlight all positions exceeding defined score (0 - 100) >=
Select small RNA libraries
You can move libraries between "Not Selected" and "Selected" by highlighting one or more libraries and then clicking on the right/left arrow. Note: If you select no libraries, all the libraries are displayed by default.
Not Selected
Visual marker
Selected
Not Selected libraries
Selected libraries
WT2003s (WT2003 wildtype leaf library from 2013 epigenome study)
WT2007s (WT2007 wildtype leaf library from 2013 epigenome study)
WT2011s (WT2011 wildtype leaf library from 2013 epigenome study)
T2iZ11R (T2-PiZt-11-R leaf library ffrom 2013 epigenome study)
T2iZ11S (T2-PiZt-11-S leaf library from 2013 epigenome study)
T4iZ11S (T4-PiZt-11-S leaf library from 2013 epigenome study)
T4iZ11R (T4-PiZt-11-R leaf library from 2013 epigenome study)
T6iZ11R (T6-PiZt-11-R leaf library from 2013 epigenome study)
T6P9R (T6-Pi9-R leaf library from 2013 epigenome study)
T6Sp1R (T6-Spin1i-1-R leaf library from 2013 epigenome study)
AGO18IP_RSV1 (Rice AGO18IP/RSV Repeat 1)
AGO18IP_RSV2 (Rice AGO18IP/RSV Repeat 2)
AGO1bIP_RSV2 (Rice AGO1bIP/RSV Repeat 2)
AGO1aIP_RSV1 (Rice AGO1aIP/RSV Repeat 1)
AGO1aIP_RSV2 (Rice AGO1aIP/RSV repeat 2)
AGO1bIP_RSV1 (Rice AGO1bIP/RSV Repeat 1)
wt_kit_adult (Rice WT Kitaake adult)
miR2_adult (Rice miR2 adult (osa-MIR159b))
miR7b_adult (Rice miR7b adult (osa-MIR398a))
miR8_adult (Rice miR8 adult (osa-MIR408))
miR390_KO1 (Rice mir390 TALEN mutant, rep 1)
miR390_KO2 (Rice mir390 TALEN mutant, rep 2)
wt390r1 (Rice, wildtype control for miR390 TALEN mutant, rep 1)
wt390r2 (Rice, wildtype control for miR390 TALEN mutant, rep 2)
Total number of libraries you have selected: 24 out of 24 (this won't change until you press the "Submit" button)
Open other sites in the same browser tab/window
Yes
No
Set the cookie(s) to expire
On closure of browser
After 7 days
After 30 days (default)
After 365 days
Please press the "Submit" button to finalize your selection.