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Rice small RNA Control Panel - rice_sRNA_flr (small RNA)
Please make your selections and press "Submit".
Select display options (for "Gene/IGR Analysis" page)
Abundance view:
Sums of abundances
Sums of hits-normalized-abundance
Individual abundances
Color small RNA sequences by size:
Yes
No
Show K-mers:
Yes
No
Select small RNA display options
Select small RNA sizes to display:
<=20
21
22
23
24
>=25
Phasing analysis enabled:
Yes
No
Each phasing cycle's length:
19
20
21
22
23
24
25
Strand(s) to show phasing windows:
Both strands (each window on its original strand -- the default view)
Top-strand only (bottom-strand windows converted to top-strand)
Bottom-strand only (top-strand windows converted to bottom-strand)
Top and bottom strands together (all windows on each strand)
Optional: Highlight all positions exceeding defined score (0 - 100) >=
Select small RNA libraries
You can move libraries between "Not Selected" and "Selected" by highlighting one or more libraries and then clicking on the right/left arrow. Note: If you select no libraries, all the libraries are displayed by default.
Not Selected
Visual marker
Selected
Not Selected libraries
Selected libraries
Gl1Da (Glume, rep 1a)
Gl1Db (Glume, rep 1b)
Gl2D (Glume, rep 2)
Gl3D (Glume, rep 3)
Pl1I (Palea/lemma, rep 1)
Pl2D (Palea/lemma, rep 2)
Lo1I (Lodicule, rep 1)
Lo2D (Lodicule, rep 2)
Lo3D (Lodicule, rep 3)
AC1I (Anther, control rep 1)
AC2D (Anther, control rep 2)
AC3D (Anther, control rep 3)
An4D (Anther, control rep 4)
AD1I (Anther, drought rep 1)
AD2D (Anther, drought rep 2)
ACd1D (Anther, cold rep 1)
Pi1I (Pistil, rep 1)
Pi1D (Pistil, rep 2)
OSA303 (Panicle stage 1, < 2 cm, rep 1)
OSA457 (Panicle stage 1, < 2 cm, rep 2)
OSA304 (Panicle stage 2, < 5 cm, rep 1)
OSA458 (Panicle stage 2, < 5 cm, rep 2)
OSA305 (Panicle stage 3, < 8 cm, rep 1)
OSA459 (Panicle stage 3, < 8 cm, rep 2)
OSA306 (Panicle stage 4,< 12 cm, rep 1)
OSA460 (Panicle stage 4,< 12 cm, rep 2)
OSA307 (Panicle stage 5, > 12 cm, rep 1)
OSA461 (Panicle stage 5, > 12 cm, rep 2)
OSA308 (Panicle stage 6, after anthesis, rep 1)
OSA462 (Panicle stage 6, after anthesis, rep 2)
Total number of libraries you have selected: 30 out of 30 (this won't change until you press the "Submit" button)
Open other sites in the same browser tab/window
Yes
No
Set the cookie(s) to expire
On closure of browser
After 7 days
After 30 days (default)
After 365 days
Please press the "Submit" button to finalize your selection.