Arabidopsis small RNA Chromosome Viewer

Below is a map of all the genes and reads that exist in the region around AT2G24103, model#1 (Chr 2, w strand, position 10,247,206 - 10,247,462). Use the chromosome image (linked to the intermediate-level viewer) to navigate. View a legend that explains the icons and colors in the image below.Adjust libraries/reads or change display options on the control panel.



0 - 2,000,0002,000,000 - 4,000,0004,000,000 - 6,000,0006,000,000 - 8,000,0008,000,000 - 10,000,00010,000,000 - 12,000,00012,000,000 - 14,000,00014,000,000 - 16,000,00016,000,000 - 18,000,00018,000,000 - 19,698,289 Clickable chromosome detail map for at_sRNA2
Click to see list of reads10,222,086 - 10,222,912<br>Type: Transposon<br>Score: 0<br>Strand: w<br>ID: HELITRONY3<br>Class: RC/Helitron<br>10,223,015 - 10,223,245<br>Type: Transposon<br>Score: 0<br>Strand: w<br>ID: HELITRON2<br>Class: RC/Helitron<br>10,223,390 - 10,223,661<br>Type: Transposon<br>Score: 0<br>Strand: c<br>ID: SIMPLEGUY1<br>Class: DNA/Harbinger<br>10,236,747 - 10,237,296<br>Type: Retrotransposon<br>Score: 0<br>Strand: c<br>ID: ATHILA7<br>Class: LTR/Gypsy<br>10,238,929 - 10,239,533<br>Type: Transposon<br>Score: 0<br>Strand: c<br>ID: ATREP2A<br>Class: RC/Helitron<br>10,240,305 - 10,240,952<br>Type: Transposon<br>Score: 0<br>Strand: c<br>ID: HELITRONY1B<br>Class: RC/Helitron<br>10,243,816 - 10,244,571<br>Type: Transposon<br>Score: 0<br>Strand: w<br>ID: HELITRONY1B<br>Class: RC/Helitron<br>10,254,668 - 10,255,016<br>Type: Transposon<br>Score: 0<br>Strand: c<br>ID: ATREP13<br>Class: RC/Helitron<br>10,255,017 - 10,255,512<br>Type: Transposon<br>Score: 0<br>Strand: w<br>ID: ARNOLDY2<br>Class: DNA/MuDR<br>10,255,513 - 10,256,096<br>Type: Transposon<br>Score: 0<br>Strand: c<br>ID: ATREP13<br>Class: RC/Helitron<br>10,271,789 - 10,271,889<br>Type: Transposon<br>Score: 0<br>Strand: c<br>ID: ATENSPM10<br>Class: DNA/En-Spm<br>AT2G24040, model #1<br>Chr 2, w strand, position 10,223,945 - 10,224,630<br>Type: protein-codingAT2G24060, model #1<br>Chr 2, w strand, position 10,229,385 - 10,231,563<br>Type: protein-codingAT2G24090, model #1<br>Chr 2, w strand, position 10,241,964 - 10,243,614<br>Type: protein-codingAT2G24100, model #1<br>Chr 2, w strand, position 10,244,886 - 10,246,919<br>Type: protein-codingath-MIR831, model #1<br>Chr 2, w strand, position 10,247,206 - 10,247,462<br>Type: miRNAAT2G24103, model #1<br>Chr 2, w strand, position 10,247,206 - 10,247,462<br>Type: miRNAAT2G24130, model #1<br>Chr 2, w strand, position 10,258,148 - 10,261,220<br>Type: protein-codingAT2G24050, model #1<br>Chr 2, c strand, position 10,225,225 - 10,228,638<br>Type: protein-codingAT2G24070, model #1<br>Chr 2, c strand, position 10,231,822 - 10,234,296<br>Type: protein-codingAT2G24080, model #1<br>Chr 2, c strand, position 10,237,604 - 10,238,779<br>Type: protein-codingAT2G24110, model #1<br>Chr 2, c strand, position 10,247,817 - 10,248,834<br>Type: protein-coding&lt;br&gt;This&amp;nbsp;gene&amp;nbsp;is&amp;nbsp;annotated&amp;nbsp;as&amp;nbsp;a&amp;nbsp;pseudogeneAT2G24120, model #1<br>Chr 2, c strand, position 10,248,911 - 10,254,641<br>Type: protein-codingAT2G24140, model #1<br>Chr 2, c strand, position 10,262,554 - 10,264,033<br>Type: protein-codingAT2G24150, model #1<br>Chr 2, c strand, position 10,265,484 - 10,267,405<br>Type: protein-codingAT2G24160, model #1<br>Chr 2, c strand, position 10,268,008 - 10,270,612<br>Type: protein-coding&lt;br&gt;This&amp;nbsp;gene&amp;nbsp;is&amp;nbsp;annotated&amp;nbsp;as&amp;nbsp;a&amp;nbsp;pseudogene10,222,206 - 10,222,705: 7810,222,706 - 10,223,205: 7010,223,206 - 10,223,705: 610,223,706 - 10,224,205: 1610,224,206 - 10,224,705: 1710,224,706 - 10,225,205: 1310,225,206 - 10,225,705: 1510,225,706 - 10,226,205: 910,226,206 - 10,226,705: 610,226,706 - 10,227,205: 410,227,206 - 10,227,705: 310,228,206 - 10,228,705: 210,228,706 - 10,229,205: 210,229,206 - 10,229,705: 6310,229,706 - 10,230,205: 4610,230,206 - 10,230,705: 4010,230,706 - 10,231,205: 7010,231,206 - 10,231,705: 21610,231,706 - 10,232,205: 410,232,206 - 10,232,705: 410,232,706 - 10,233,205: 1210,233,206 - 10,233,705: 9410,233,706 - 10,234,205: 310,234,206 - 10,234,705: 510,234,706 - 10,235,205: 110,235,206 - 10,235,705: 510,235,706 - 10,236,205: 110,236,206 - 10,236,705: 110,236,706 - 10,237,205: 210,237,206 - 10,237,705: 15710,237,706 - 10,238,205: 110,238,206 - 10,238,705: 210,238,706 - 10,239,205: 95610,239,206 - 10,239,705: 2,19510,239,706 - 10,240,205: 110,240,206 - 10,240,705: 410,240,706 - 10,241,205: 21910,241,206 - 10,241,705: 3410,241,706 - 10,242,205: 10410,242,206 - 10,242,705: 16410,242,706 - 10,243,205: 1410,243,206 - 10,243,705: 23110,243,706 - 10,244,205: 710,244,206 - 10,244,705: 110,244,706 - 10,245,205: 1010,245,206 - 10,245,705: 3110,245,706 - 10,246,205: 2610,246,206 - 10,246,705: 2610,246,706 - 10,247,205: 1810,247,206 - 10,247,705: 85310,248,206 - 10,248,705: 310,248,706 - 10,249,205: 310,249,206 - 10,249,705: 110,249,706 - 10,250,205: 210,251,706 - 10,252,205: 110,252,206 - 10,252,705: 110,253,706 - 10,254,205: 110,254,206 - 10,254,705: 2810,254,706 - 10,255,205: 57210,255,206 - 10,255,705: 5,89510,255,706 - 10,256,205: 4,07010,256,206 - 10,256,705: 210,256,706 - 10,257,205: 110,257,206 - 10,257,705: 110,258,206 - 10,258,705: 310,258,706 - 10,259,205: 110,259,206 - 10,259,705: 410,259,706 - 10,260,205: 510,260,206 - 10,260,705: 310,260,706 - 10,261,205: 410,261,206 - 10,261,705: 210,261,706 - 10,262,205: 210,262,206 - 10,262,705: 110,262,706 - 10,263,205: 210,263,206 - 10,263,705: 310,263,706 - 10,264,205: 210,264,206 - 10,264,705: 110,264,706 - 10,265,205: 1110,265,206 - 10,265,705: 710,265,706 - 10,266,205: 1510,266,706 - 10,267,205: 1110,267,206 - 10,267,705: 610,268,206 - 10,268,705: 110,268,706 - 10,269,205: 710,269,206 - 10,269,705: 410,269,706 - 10,270,205: 1310,270,206 - 10,270,705: 310,270,706 - 10,271,205: 610,271,706 - 10,272,205: 310,222,206 - 10,222,705: 1210,222,706 - 10,223,205: 9610,223,206 - 10,223,705: 1210,223,706 - 10,224,205: 110,224,206 - 10,224,705: 710,224,706 - 10,225,205: 1310,225,206 - 10,225,705: 4510,225,706 - 10,226,205: 6710,226,206 - 10,226,705: 7610,226,706 - 10,227,205: 4410,227,206 - 10,227,705: 2910,227,706 - 10,228,205: 4310,228,206 - 10,228,705: 1310,228,706 - 10,229,205: 110,229,206 - 10,229,705: 310,230,206 - 10,230,705: 410,230,706 - 10,231,205: 510,231,206 - 10,231,705: 410,231,706 - 10,232,205: 110,232,206 - 10,232,705: 310,232,706 - 10,233,205: 1110,233,206 - 10,233,705: 1710,234,206 - 10,234,705: 410,235,706 - 10,236,205: 210,236,206 - 10,236,705: 610,236,706 - 10,237,205: 210,237,206 - 10,237,705: 110,237,706 - 10,238,205: 110,238,206 - 10,238,705: 310,238,706 - 10,239,205: 2,32410,239,206 - 10,239,705: 12,91510,239,706 - 10,240,205: 110,240,206 - 10,240,705: 210,240,706 - 10,241,205: 1,23210,241,206 - 10,241,705: 8010,241,706 - 10,242,205: 410,242,206 - 10,242,705: 110,243,206 - 10,243,705: 310,243,706 - 10,244,205: 110,244,706 - 10,245,205: 110,245,206 - 10,245,705: 110,245,706 - 10,246,205: 210,246,706 - 10,247,205: 410,247,706 - 10,248,205: 1210,248,206 - 10,248,705: 2510,248,706 - 10,249,205: 1910,249,206 - 10,249,705: 1410,249,706 - 10,250,205: 3710,250,206 - 10,250,705: 1410,250,706 - 10,251,205: 1810,251,206 - 10,251,705: 1310,251,706 - 10,252,205: 6510,252,206 - 10,252,705: 3410,252,706 - 10,253,205: 610,253,206 - 10,253,705: 2910,253,706 - 10,254,205: 3510,254,206 - 10,254,705: 5610,254,706 - 10,255,205: 2,36010,255,206 - 10,255,705: 6,19110,255,706 - 10,256,205: 2,64310,256,206 - 10,256,705: 310,257,206 - 10,257,705: 110,257,706 - 10,258,205: 110,258,206 - 10,258,705: 810,258,706 - 10,259,205: 410,259,206 - 10,259,705: 310,259,706 - 10,260,205: 410,260,206 - 10,260,705: 510,260,706 - 10,261,205: 110,261,206 - 10,261,705: 510,262,206 - 10,262,705: 310,262,706 - 10,263,205: 410,263,206 - 10,263,705: 610,263,706 - 10,264,205: 410,264,206 - 10,264,705: 210,264,706 - 10,265,205: 710,265,206 - 10,265,705: 3210,265,706 - 10,266,205: 11410,266,206 - 10,266,705: 2210,266,706 - 10,267,205: 9510,267,206 - 10,267,705: 14510,267,706 - 10,268,205: 810,268,206 - 10,268,705: 1610,268,706 - 10,269,205: 1310,269,206 - 10,269,705: 1310,269,706 - 10,270,205: 2810,270,206 - 10,270,705: 1810,270,706 - 10,271,205: 110,271,206 - 10,271,705: 210,271,706 - 10,272,205: 1 Chromosome map