comPARE (PARE Validated miRNA Targets)

The results available on this page may have a high false discovery rate if not correctly filtered and manually checked. In the results, an entry ending with "_up" indicates an intergenic region upstream (5') of the gene identifier whereas an entry with "_down" corresponds to an intergenic region downstream (3') of the last gene on a chromosome. The results are derived from only the libraries in the selected small RNA and PARE databases, and thus are inherently incomplete; libraries from additional tissues, treatments, or genotypes may identify additional candidate miRNAs or targets.

Select PARE db(s):

Look for Annotated genes Intergenic regions Both

Look up a specific miRNA and/or target

miRNA identifier:	miR (e.g. '156', '156a')
Target gene identifier: (partial match accepted)

Set search criteria

Target score:		(default <=5)
P-value:	corrected p-value p-value
		(default <=0.05)
Small window:		(default >=10)
Window ratio:		(default >=0.7)
Signal class:		(default <=3)
Predicted function:

Select a small RNA db for each species' miRNA links

Arabidopsis (TAIR10):
Maize_B73 (B73v5):
Medicago (MIPS3):
Rice (MSU7):