Rice small RNA Information



Reads existing in this region (Chr 1, 20,086,207 - 20,086,629):  1 - 168 of 168      


Page 1 of 1:    1    
#SequenceHitsCoordinateStrandLenSeparatorGl1DaGl1DbGl2DGl3DPl1IPl2DLo1ILo2DLo3DAC1IAC2DAC3DAn4DAD1IAD2DACd1DPi1IPi1DOSA303OSA457OSA304OSA458OSA305OSA459OSA306OSA460OSA307OSA461OSA308OSA462
Signature abundances normalized to (varies by library depth): Separator2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M2M10M10M10M10M10M10M10M10M10M10M10M10M
1CGGCGACACGCTTGCAGTAAAGGC120,086,208c24Separator000000000000000000010000000000
2TACGCTTCGCTTCGGCGACAC120,086,220c21Separator0000000001110100100000000001000
3CTTTCGATCCCCCCCTCACTCGGA120,086,221w24Separator000000000000000000001000000000
4AGTACGCTTCGCTTCGGCGACACG120,086,222c24Separator000000000000000000001000110000
5TTCGATCCCCCCCTCACTCGG120,086,223w21Separator000000000000000200011031000000
6TTCGATCCCCCCCTCACTCGGA120,086,223w22Separator000000000000000000000101000000
7GAAAGTACGCTTCGCTTCGGCGAC120,086,225c24Separator000000000000000000000100000000
8ATCGAAAGTACGCTTCGCTTCGGC120,086,228c24Separator000000000000000000010000000000
9TCCCCCCCTCACTCGGATGAG120,086,228w21Separator000000000000000000100000000000
10GGGGGATCGAAAGTACGCTTCGCT120,086,233c24Separator000000000001000000000000100000
11CCTCACTCGGATGAGAATAGT220,086,234w21Separator000000000000000000010000000000
12CCTCACTCGGATGAGAATAGTGGT120,086,234w24Separator000000000000000000000100000000
13GGGGGGATCGAAAGTACGCTTCGC120,086,234c24Separator000000000000000001000000000100
14CTCACTCGGATGAGAATAGTGG220,086,235w22Separator000000000000001000000000000000
15TCACTCGGATGAGAATAGT220,086,236w19Separator000000000000000000000001000000
16TCACTCGGATGAGAATAGTGGT120,086,236w22Separator000000000010000000000100000000
17CACTCGGATGAGAATAGTGGT120,086,237w21Separator000000000000000010000000000000
18CACTCGGATGAGAATAGTGGTGGA120,086,237w24Separator000000000001000000000001000000
19TCGGATGAGAATAGTGGTGGATTCA120,086,240w25Separator000100000000000000000000000000
20ATGAGAATAGTGGTGGATTCA120,086,244w21Separator000000000010100100010101000000
21TGAGAATAGTGGTGGATTCAC120,086,245w21Separator000000000000002000000000000000
22AATCCACCACTATTCTCATCC120,086,262c21Separator000000000000000000000110000000
23CCGCCCGGGCAGCACGGGCAG120,086,265w21Separator000000000000000000001000000000
24CGGGCGGTGAATCCACCACTA120,086,271c21Separator000000000000000000001000000000
25CCGGGCGGTGAATCCACCACT120,086,272c21Separator000000000000000000001000100000
26TGCCCGGGCGGTGAATCCACC120,086,275c21Separator000000000000000000100000000000
27ACGGGCAGCTGTGCAGGGTTCACA120,086,278w24Separator000000000000000000000000000001
28CTGTGCAGGGTTCACAGCGAT120,086,286w21Separator000000000000000000010000001100
29TGCACAGCTGCCCGTGCTGCC120,086,292c21Separator000000000000000000010000000000
30TCACAGCGATAAACCTTGGAT120,086,297w21Separator000000000000000000000100000000
31GTGAACCCTGCACAGCTGCCCGTG120,086,300c24Separator000000000000000000001000000000
32TGTGAACCCTGCACAGCT120,086,301c18Separator000000000000000000000000100000
33TGTGAACCCTGCACAGCTGCCCG120,086,301c23Separator000000000000000000001000000000
34CTGTGAACCCTGCACAGCT120,086,302c19Separator000000000000000000000100000000
35CGATAAACCTTGGATATTGACGCT120,086,303w24Separator000000000000000000000000100000
36CGCTGTGAACCCTGCACAGCT120,086,304c21Separator000000000000000000000100000000
37TCGCTGTGAACCCTGCACAG120,086,305c20Separator000000000000000000000000010000
38TCGCTGTGAACCCTGCACAGC120,086,305c21Separator000000000000000000011000000000
39ATCGCTGTGAACCCTGCACAG120,086,306c21Separator000000000000000000010100000000
40AAACCTTGGATATTGACG120,086,307w18Separator000000000000000000000001000000
41AAACCTTGGATATTGACGCT120,086,307w20Separator000000000000000000000000100000
42AAACCTTGGATATTGACGCTA120,086,307w21Separator000000101010201001011121100000
43TTATCGCTGTGAACCCTGCACAGC120,086,308c24Separator000000000000000000000000010000
44TTTATCGCTGTGAACCCTGCACAG120,086,309c24Separator000000000000000000100100000100
45AGGTTTATCGCTGTGAACCCT120,086,312c21Separator000000000000000000000000001000
46AAGGTTTATCGCTGTGAACCC220,086,313c21Separator000000000000000000001100000000
47CCAAGGTTTATCGCTGTGAACCC120,086,315c23Separator000000000000000000001000100000
48CCAAGGTTTATCGCTGTGAACCCT120,086,315c24Separator000000000000000000010000100000
49ATCCAAGGTTTATCGCTGTGAACC120,086,317c24Separator000000000000000000110000000001
50TATTGACGCTAATTCTTCCCT120,086,317w21Separator000000000000000000000110000000
51TATCCAAGGTTTATCGCTGTGAAC120,086,318c24Separator000000000000000000000000000001
52ATTCTTCCCTAAAATAGAT120,086,328w19Separator000000000000000000001000000000
53ATTCTTCCCTAAAATAGATTAGTT120,086,328w24Separator000000000001000000000000000000
54TTCTTCCCTAAAATAGATTAG120,086,329w21Separator000000000000000000001111000000
55TAAAATAGATTAGTTACCGCC120,086,337w21Separator000000000000000000001101000000
56AAAATAGATTAGTTACCGCCTGACC120,086,338w25Separator000000000000000000010000000000
57AAATAGATTAGTTACCGCCTGACC120,086,339w24Separator000000000000000000000000000001
58GTTACCGCCTGACCGGGCAAC120,086,349w21Separator000000000000000000001010000000
59TGACCGGGCAACATATGCTTGT120,086,358w22Separator000000000000000000001000000000
60TCAGGCGGTAACTAATCTATT120,086,360c21Separator000000000000000100000000000000
61CCGGTCAGGCGGTAACTAATCTAT120,086,364c24Separator000000000000001000000000000000
62TGCCCGGTCAGGCGGTAACTA120,086,367c21Separator000010111030106211001101000000
63ACATATGCTTGTCAAAGGTTGGTG120,086,368w24Separator000000000000000000000000000001
64TTGCCCGGTCAGGCGGTAACT120,086,368c21Separator000000000000000000441010125703212
65TTGCCCGGTCAGGCGGTAACTA120,086,368c22Separator000000000000000100000000000000
66ATATGCTTGTCAAAGGTTGGT120,086,370w21Separator000000000000100000014301101001
67TATGCTTGTCAAAGGTTGGTG120,086,371w21Separator000000000010001100021101000002
68TCAAAGGTTGGTGTCCTGCAA120,086,379w21Separator000000000000100000000000000000
69AAAGGTTGGTGTCCTGCAAACGGC120,086,381w24Separator000000001000000000000000000000
70GTCCTGCAAACGGCTACCCTG120,086,391w21Separator000000000000000000000000000001
71TCCTGCAAACGGCTACCCTGC120,086,392w21Separator000000000010000100010100100000
72CCTGCAAACGGCTACCCTGCA120,086,393w21Separator000000000010000000000000000000
73AGGACACCAACCTTTGACAAGCAT120,086,395c24Separator000000000000100010000000000000
74GCAGGACACCAACCTTTGACAAGC120,086,397c24Separator000000000000000000000000001000
75GTAGCCGTTTGCAGGACAC120,086,407c19Separator000000000000000000000000000100
76GGGTAGCCGTTTGCAGGACA120,086,409c20Separator000000000000000000000001000000
77GGGTAGCCGTTTGCAGGACAC120,086,409c21Separator011001000000000101024132201102
78GGGTAGCCGTTTGCAGGACACC120,086,409c22Separator000000000000000000001000000000
79AGGGTAGCCGTTTGCAGGACA120,086,410c21Separator000000000000000000001100000000
80CAGGGTAGCCGTTTGCAGGACA120,086,411c22Separator000000000000000000010000000000
81CAGGCCGAAAAACCTATCGCA120,086,412w21Separator000000000000000000000001000000
82AGGCCGAAAAACCTATCGCAC120,086,413w21Separator000000000000000000001100000000
83AAAACCTATCGCACGATCGATCG120,086,420w23Separator000000000000000000000000001000
84AAAACCTATCGCACGATCGATCGC120,086,420w24Separator001000000000000000000000000000
85AAAACCTATCGCACGATCGATCGCC120,086,420w25Separator000000000000000000211001101000
86AAACCTATCGCACGATCGATCGCC120,086,421w24Separator000000000000100000512122100212
87AACCTATCGCACGATCGATCGCC120,086,422w23Separator000000000000000000010001001000
88ACCTATCGCACGATCGATCGCC120,086,423w22Separator000000000000000000011001000001
89TTTTTCGGCCTGCAGGGTAGC120,086,423c21Separator000000100000000000000000000000
90CCTATCGCACGATCGATCGCC120,086,424w21Separator000000000000000000113431101002
91AGGTTTTTCGGCCTGCAGGGTAGC120,086,426c24Separator000000000001000000000000000000
92TATCGCACGATCGATCGCCCC120,086,426w21Separator000000000000000000001000000000
93TAGGTTTTTCGGCCTGCAGGGTAGC120,086,427c25Separator000000000000000000001000000000
94GATAGGTTTTTCGGCCTGCAGGGTA120,086,429c25Separator000000000000000000000000001000
95CGATAGGTTTTTCGGCCT120,086,430c18Separator000000000000000000001000000000
96CGATAGGTTTTTCGGCCTGC120,086,430c20Separator000000000000000000010114201000
97CGATAGGTTTTTCGGCCTGCA120,086,430c21Separator000000000000000000025312103101
98GCACGATCGATCGCCCCAAGTGAT120,086,430w24Separator000000000000000000200210100000
99GCGATAGGTTTTTCGGCC120,086,431c18Separator000000000000000000001000000020
100GCGATAGGTTTTTCGGCCTGC120,086,431c21Separator000000000000000000225370102002
101TGCGATAGGTTTTTCGGCCTGC120,086,432c22Separator000000000000000000001000000000
102CGATCGATCGCCCCAAGTGA120,086,433w20Separator000000000000000000000110001001
103CGATCGATCGCCCCAAGTGAT120,086,433w21Separator0000000000000000001760439750822331411225
104GTGCGATAGGTTTTTCGGCCTGC120,086,433c23Separator000000000000000000100000000000
105GTGCGATAGGTTTTTCGGCCTGCA120,086,433c24Separator000000000000000000000000001000
106CGTGCGATAGGTTTTTCGGCC120,086,434c21Separator000000000000000000010000000001
107GATCGATCGCCCCAAGTGAT120,086,434w20Separator000000000000000000000000100000
108ATCGATCGCCCCAAGTGAT120,086,435w19Separator000000000000000000000000000001
109CGATCGTGCGATAGGTTTTTCGGC120,086,438c24Separator000000000000000000010000000000
110CGCCCCAAGTGATCAGTTCCCCTC120,086,441w24Separator000000000000000000001000000000
111GATCGATCGTGCGATAGGT120,086,441c19Separator000000000000000000100000000000
112CGATCGATCGTGCGATAGGT120,086,442c20Separator000000000000000000000010000000
113GGCGATCGATCGTGCGATAGG120,086,444c21Separator000100000000000000000000000000
114GGGGCGATCGATCGTGCGATAGGT120,086,446c24Separator000000000000000000011000000000
115ACTTGGGGCGATCGATCGTGCGAT120,086,450c24Separator000000000000000000101100100000
116CACTTGGGGCGATCGATCGT120,086,451c20Separator000000000000000000000010000000
117CACTTGGGGCGATCGATCGTG120,086,451c21Separator000000000000000000011222000000
118CACTTGGGGCGATCGATCGTGCGA120,086,451c24Separator000000000000000000000100001000
119TCACTTGGGGCGATCGATCGT120,086,452c21Separator000000000000100300111101000001
120ATCACTTGGGGCGATCGATCGTGC120,086,453c24Separator000000000001000000000000000000
121CAGTTCCCCTCTCCCATACGG120,086,454w21Separator000000000000000000000110000000
122TGATCACTTGGGGCGATCGATCGT120,086,455c24Separator000000010000000000000000000000
123GGAACTGATCACTTGGGGC120,086,460c19Separator000000000000000000000000001000
124GGAACTGATCACTTGGGGCGA120,086,460c21Separator000000000000000000010000000000
125GGGAACTGATCACTTGGGGCGATC120,086,461c24Separator000000000001000000000000000000
126GGGGAACTGATCACTTGGGGC120,086,462c21Separator000000000000000000000100000000
127GGGGAACTGATCACTTGGGGCGAT120,086,462c24Separator000000000000100000000000000000
128AGAGGGGAACTGATCACTTGGGGC120,086,465c24Separator000000000000000000010001000000
129ATGGGAGAGGGGAACTGATCACTT120,086,470c24Separator000000000000000000000001100000
130GTATGGGAGAGGGGAACTGAT120,086,472c21Separator000000000000000000000001000000
131GTATGGGAGAGGGGAACTGATCAC120,086,472c24Separator000000000000000001000000000000
132TTTTCCTTTTTGTCACCGCTT120,086,475w21Separator000000000000000000100001000000
133TTTCCTTTTTGTCACCGCTTT120,086,476w21Separator000000000000000000000010000000
134AATAGAAAAGTAAAGCGGTGACAA120,086,507c24Separator000000000000000000000000100000
135ACTAAAATAGAAAAGTAAAGCGGT120,086,512c24Separator000000000000000000010000000000
136TTTATACATCTGAAGTTTGTACACC120,086,516w25Separator000000000000000000010000000000
137TTATACATCTGAAGTTTGT120,086,517w19Separator000000000000000000001000000000
138TTATACATCTGAAGTTTGTA120,086,517w20Separator000000000000000000010100000000
139TTATACATCTGAAGTTTGTAC120,086,517w21Separator000000000000100000000101100100
140TTATACATCTGAAGTTTGTACACC120,086,517w24Separator000000000000000000000100000000
141TTATACATCTGAAGTTTGTACACCT120,086,517w25Separator000000000000000000001000000000
142TATACATCTGAAGTTTGTACACCT120,086,518w24Separator000000000000000000001100000000
143TAAACTTACTAAAATAGAAAAGT320,086,519c23Separator000000000000000000000000001000
144TACATCTGAAGTTTGTACACC120,086,520w21Separator000000000000000000001010000000
145CATCTGAAGTTTGTACACCTAAAG120,086,522w24Separator000000000000000000000000000001
146AACTTCAGATGTATAAACTTACT120,086,532c23Separator000000000000000000000000100000
147AAACTTCAGATGTATAAACTTACT120,086,533c24Separator000000000000000000001000000000
148TTTAGGTGTACAAACTTCAGA120,086,544c21Separator000000000000000100001000000000
149AAACTTTAGGTGTACAAACTTCAG120,086,548c24Separator000000000000001000000000000000
150TAAACTTTAGGTGTACAAACT1420,086,549c21Separator000000000000000000000001000000
151TATAAACTTTAGGTGTACAAACT1120,086,551c23Separator000000000000000000101000000000
152AGATATATAAACTTTAGGTGT220,086,556c21Separator000000000000000000000001000000
153TAGATATATAAACTTTAGGTG220,086,557c21Separator000000000000000000000010000000
154TAAACTTTAGATATATAAACT1220,086,564c21Separator000000000000000000010000000000
155GTGTATAAACTTTAGATA4120,086,569c18Separator000000000000000000001000000000
156TAGGTGTATAAACTTTAG84620,086,572c18Separator000000000000000100000000000000
157TAGGTGTATAAACTTTAGA79720,086,572c19Separator000000000000000000001001000000
158TAGGTGTATAAACTTTAGAT78420,086,572c20Separator000000000000000000001000101000
159TTAGGTGTATAAACTTTAGAT76920,086,573c21Separator000000000000000000000000100000
160TTTAGGTGTATAAACTTTA90520,086,574c19Separator000000000000000000000010000000
161TTTAGGTGTATAAACTTTAG81920,086,574c20Separator000000000000000000000020000000
162TTTAGGTGTATAAACTTTAGA77120,086,574c21Separator000000000000000000011101000120
163TTTAGGTGTATAAACTTTAGAT75920,086,574c22Separator000000000000000000310111100011
164TTTATACACCTAAAGTTT1,08920,086,591w18Separator000000000000000000000000001000
165TATACACCTAAAGTTTATACC320,086,593w21Separator000000000000000000001000000001
166TAAACTTTAGGTGTATAAATT15920,086,609c21Separator000000000000000000000000100000
167TATAAACTTTAGGTGTAT90620,086,611c18Separator000000000000000000000000000001
168TATAAACTTTAGGTGTATAAATTT11920,086,611c24Separator000000000000000000000000000100



Number of unique reads retrieved on this page: 144