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Rice Small RNA - Flower

DBs for Same Genome

ChIP
PARE
PARE - ago1d
PARE - Drought
RNA-seq
RNA-seq - ago1d
RNA-seq - Anther
RNA-seq - Drought
RNA-seq - Kitaake Anther
RNA-seq - Submerge
Small RNA
Small RNA - 2
Small RNA - 3
Small RNA - 4
Small RNA - 5
Small RNA - ago1d
Small RNA - DCL CRISPR
Small RNA - Drought
Small RNA - Kitaake Anther
Small RNA - m6a
Small RNA - Submerge
MetC-seq

DBs for Close Species

Opunctata PARE
Opunctata Small RNA
Obrachy PARE
Obrachy Small RNA
Oglab RNA-seq
Oglab Small RNA

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Rice small RNA Chromosome Viewer

A map of the all the genes and reads that exist in the region you select may be displayed below.

New Search Control Panel Legend JSON DataTabular ViewLibrary Abundances

Start a new gene search

Gene ID: Model # (optional):
Padding at each end: nt
Base pairs per pixel: Image scaling:

Start a new coordinate search

Chromosome or contig:   Start:   End (optional):
Padding at each end: nt    Mark the unpadded region:    yes    no
Base pairs per pixel:    Image scaling:

Start a new cluster search

A cluster ID is of the format 'RICE_MSU7.[chr_id].[start].[length]'.
Cluster ID: Size (ignore the size specified in cluster ID):
Base pairs per pixel: Image scaling:

Next-Gen Sequence DBs Copyright © 2026 Meyers Lab, UC Davis Genome Center