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Brassicaceae Small RNA
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Brassica rapa small RNA Chromosome Viewer
A map of the all the genes and reads that exist in the region you select may be displayed below.
New Search
Control Panel
Legend
JSON Data
Tabular View
Library Abundances
Start a new gene search
Gene ID:
Model # (optional):
Padding at each end:
nt
Base pairs per pixel:
10 - Least condensed
20
30 - Standard
50
100
150
200 - Most condensed
Image scaling:
None
2X
3X
6X
10X
20X
Start a new coordinate search
Chromosome or contig:
Select chromosome or contig
Chr 1 (29595527 bp)
Chr 2 (31442979 bp)
Chr 3 (38154160 bp)
Chr 4 (21928416 bp)
Chr 5 (28493056 bp)
Chr 6 (29167992 bp)
Chr 7 (28928902 bp)
Chr 8 (22981702 bp)
Chr 9 (45156810 bp)
Chr 10 (77304862 bp)
Unmapped BAC Regions (57110952 bp)
Start:
End (optional):
Padding at each end:
nt Mark the unpadded region:
yes
no
Base pairs per pixel:
10 - Least condensed
20
30 - Standard
50
100
150
200 - Most condensed
Image scaling:
None
2X
3X
6X
10X
20X
Start a new cluster search
A cluster ID is of the format 'BRASSICARAPA_BRAD3.[chr_id].[start].[length]'.
Cluster ID:
Size (ignore the size specified in cluster ID):
250 bp
500 bp
1 kb
Base pairs per pixel:
10 - Least condensed
20
30 - Standard
50
100
150
200 - Most condensed
Image scaling:
None
2X
3X
6X
10X
20X