N. benthi small RNA Chromosome Viewer

Below is a map of all the genes and reads that exist in the region of Chr 3, position 38,200,000 - 38,250,000. Use the chromosome image (linked to the intermediate-level viewer) to navigate. View a legend that explains the icons and colors in the image below.Adjust libraries/reads or change display options on the control panel.



0 - 5,000,0005,000,000 - 10,000,00010,000,000 - 15,000,00015,000,000 - 20,000,00020,000,000 - 25,000,00025,000,000 - 30,000,00030,000,000 - 35,000,00035,000,000 - 40,000,00040,000,000 - 45,000,00045,000,000 - 50,000,00050,000,000 - 55,000,00055,000,000 - 60,000,00060,000,000 - 65,000,00065,000,000 - 70,000,00070,000,000 - 75,000,00075,000,000 - 80,000,00080,000,000 - 85,000,00085,000,000 - 90,000,00090,000,000 - 95,000,00095,000,000 - 100,000,000100,000,000 - 105,000,000105,000,000 - 110,000,000110,000,000 - 115,000,000115,000,000 - 120,000,000120,000,000 - 125,000,000125,000,000 - 129,979,819 Clickable chromosome detail map for nbenthi_sRNA_SOL
Click to see list of reads38,209,285 - 38,209,321<br>Type: Other<br>Score: 274<br>Strand: w<br>ID: tRNA-Arg4_OS<br>Class: tRNA<br>38,245,082 - 38,251,539<br>Type: Inverted<br>Score: 331<br>Start1: 38,245,082<br>End1: 38,245,196<br>Start2: 38,251,425<br>End2: 38,251,539<br>Percent Identity: 98<br>Distance: 6228<br>38,214,495 - 38,215,500<br>Type: Tandem<br>Score: 1003<br>Percent Identity: 79<br>Number of Repeats: 9.1<br>Size per Repeat: 111<br>Total Length: 1006<br>38,214,495 - 38,215,503<br>Type: Tandem<br>Score: 1056<br>Percent Identity: 81<br>Number of Repeats: 18.3<br>Size per Repeat: 55<br>Total Length: 1009<br>38,200,000 - 38,200,499: 138,200,500 - 38,200,999: 138,201,000 - 38,201,499: 138,201,500 - 38,201,999: 438,202,000 - 38,202,499: 638,202,500 - 38,202,999: 638,203,000 - 38,203,499: 138,203,500 - 38,203,999: 138,204,000 - 38,204,499: 838,204,500 - 38,204,999: 438,205,000 - 38,205,499: 238,205,500 - 38,205,999: 3238,206,000 - 38,206,499: 1238,206,500 - 38,206,999: 538,207,000 - 38,207,499: 338,207,500 - 38,207,999: 838,208,000 - 38,208,499: 13738,208,500 - 38,208,999: 4338,209,000 - 38,209,499: 15138,209,500 - 38,209,999: 13538,210,000 - 38,210,499: 8838,210,500 - 38,210,999: 35238,211,000 - 38,211,499: 138,211,500 - 38,211,999: 138,212,000 - 38,212,499: 338,212,500 - 38,212,999: 1,03238,213,000 - 38,213,499: 5038,213,500 - 38,213,999: 6738,214,000 - 38,214,499: 12738,214,500 - 38,214,999: 8838,215,000 - 38,215,499: 6638,215,500 - 38,215,999: 738,216,000 - 38,216,499: 138,216,500 - 38,216,999: 338,217,000 - 38,217,499: 338,217,500 - 38,217,999: 2938,218,000 - 38,218,499: 1438,218,500 - 38,218,999: 438,219,000 - 38,219,499: 238,219,500 - 38,219,999: 1138,220,000 - 38,220,499: 138,220,500 - 38,220,999: 138,221,000 - 38,221,499: 1138,221,500 - 38,221,999: 438,222,000 - 38,222,499: 638,222,500 - 38,222,999: 638,223,000 - 38,223,499: 238,223,500 - 38,223,999: 438,224,000 - 38,224,499: 638,224,500 - 38,224,999: 238,225,000 - 38,225,499: 638,225,500 - 38,225,999: 238,226,000 - 38,226,499: 738,226,500 - 38,226,999: 138,227,500 - 38,227,999: 938,228,000 - 38,228,499: 1338,228,500 - 38,228,999: 5238,229,000 - 38,229,499: 5038,229,500 - 38,229,999: 13938,230,000 - 38,230,499: 10538,230,500 - 38,230,999: 438,231,000 - 38,231,499: 238,232,000 - 38,232,499: 238,232,500 - 38,232,999: 538,233,000 - 38,233,499: 938,233,500 - 38,233,999: 238,234,000 - 38,234,499: 138,235,000 - 38,235,499: 138,235,500 - 38,235,999: 338,236,000 - 38,236,499: 1338,236,500 - 38,236,999: 1238,237,000 - 38,237,499: 15838,237,500 - 38,237,999: 1038,238,000 - 38,238,499: 138,238,500 - 38,238,999: 538,239,000 - 38,239,499: 238,240,500 - 38,240,999: 438,241,000 - 38,241,499: 238,241,500 - 38,241,999: 338,242,500 - 38,242,999: 13538,243,000 - 38,243,499: 3438,243,500 - 38,243,999: 438,244,500 - 38,244,999: 338,245,000 - 38,245,499: 1238,245,500 - 38,245,999: 2238,246,000 - 38,246,499: 1538,246,500 - 38,246,999: 738,247,000 - 38,247,499: 938,247,500 - 38,247,999: 1938,248,000 - 38,248,499: 438,248,500 - 38,248,999: 338,249,000 - 38,249,499: 138,249,500 - 38,249,999: 838,200,000 - 38,200,499: 238,201,000 - 38,201,499: 138,201,500 - 38,201,999: 338,202,000 - 38,202,499: 438,202,500 - 38,202,999: 438,203,000 - 38,203,499: 238,203,500 - 38,203,999: 238,204,000 - 38,204,499: 338,204,500 - 38,204,999: 638,205,000 - 38,205,499: 138,205,500 - 38,205,999: 7938,206,000 - 38,206,499: 438,206,500 - 38,206,999: 238,207,000 - 38,207,499: 538,207,500 - 38,207,999: 738,208,000 - 38,208,499: 3638,208,500 - 38,208,999: 1238,209,000 - 38,209,499: 1838,209,500 - 38,209,999: 9438,210,000 - 38,210,499: 20438,210,500 - 38,210,999: 12338,211,500 - 38,211,999: 1138,212,000 - 38,212,499: 138,212,500 - 38,212,999: 97938,213,000 - 38,213,499: 8,37438,213,500 - 38,213,999: 5138,214,000 - 38,214,499: 16238,214,500 - 38,214,999: 13738,215,000 - 38,215,499: 5838,215,500 - 38,215,999: 1638,216,000 - 38,216,499: 538,216,500 - 38,216,999: 2238,217,000 - 38,217,499: 638,217,500 - 38,217,999: 17938,218,000 - 38,218,499: 2038,218,500 - 38,218,999: 2238,219,000 - 38,219,499: 938,219,500 - 38,219,999: 538,220,000 - 38,220,499: 138,220,500 - 38,220,999: 438,221,000 - 38,221,499: 2238,221,500 - 38,221,999: 738,222,000 - 38,222,499: 338,222,500 - 38,222,999: 338,223,000 - 38,223,499: 938,223,500 - 38,223,999: 438,224,000 - 38,224,499: 438,224,500 - 38,224,999: 538,225,000 - 38,225,499: 338,225,500 - 38,225,999: 238,226,000 - 38,226,499: 338,226,500 - 38,226,999: 2238,227,500 - 38,227,999: 4738,228,000 - 38,228,499: 4438,228,500 - 38,228,999: 3838,229,000 - 38,229,499: 4538,229,500 - 38,229,999: 15038,230,000 - 38,230,499: 8038,230,500 - 38,230,999: 738,231,000 - 38,231,499: 938,231,500 - 38,231,999: 938,232,000 - 38,232,499: 1,39938,232,500 - 38,232,999: 15638,233,000 - 38,233,499: 1838,233,500 - 38,233,999: 438,234,000 - 38,234,499: 1038,234,500 - 38,234,999: 2538,235,500 - 38,235,999: 238,236,000 - 38,236,499: 1838,236,500 - 38,236,999: 238,237,000 - 38,237,499: 6238,237,500 - 38,237,999: 1738,238,500 - 38,238,999: 138,240,500 - 38,240,999: 1438,241,000 - 38,241,499: 538,242,500 - 38,242,999: 838,243,000 - 38,243,499: 338,243,500 - 38,243,999: 738,244,000 - 38,244,499: 338,244,500 - 38,244,999: 3838,245,000 - 38,245,499: 538,245,500 - 38,245,999: 3338,246,000 - 38,246,499: 1238,246,500 - 38,246,999: 538,247,000 - 38,247,499: 6138,247,500 - 38,247,999: 738,248,000 - 38,248,499: 9738,248,500 - 38,248,999: 238,249,000 - 38,249,499: 338,249,500 - 38,249,999: 1 Chromosome map