N. benthi small RNA Chromosome Viewer

Below is a map of all the genes and reads that exist in the region of Chr 3, position 43,700,000 - 43,750,000. Use the chromosome image (linked to the intermediate-level viewer) to navigate. View a legend that explains the icons and colors in the image below.Adjust libraries/reads or change display options on the control panel.



0 - 5,000,0005,000,000 - 10,000,00010,000,000 - 15,000,00015,000,000 - 20,000,00020,000,000 - 25,000,00025,000,000 - 30,000,00030,000,000 - 35,000,00035,000,000 - 40,000,00040,000,000 - 45,000,00045,000,000 - 50,000,00050,000,000 - 55,000,00055,000,000 - 60,000,00060,000,000 - 65,000,00065,000,000 - 70,000,00070,000,000 - 75,000,00075,000,000 - 80,000,00080,000,000 - 85,000,00085,000,000 - 90,000,00090,000,000 - 95,000,00095,000,000 - 100,000,000100,000,000 - 105,000,000105,000,000 - 110,000,000110,000,000 - 115,000,000115,000,000 - 120,000,000120,000,000 - 125,000,000125,000,000 - 129,979,819 Clickable chromosome detail map for nbenthi_sRNA_SOL
Click to see list of reads43,738,780 - 43,739,021<br>Type: Inverted<br>Score: 308<br>Start1: 43,738,780<br>End1: 43,738,898<br>Start2: 43,738,901<br>End2: 43,739,021<br>Percent Identity: 96<br>Distance: 2<br>43,739,062 - 43,740,235<br>Type: Inverted<br>Score: 763<br>Start1: 43,739,062<br>End1: 43,739,489<br>Start2: 43,739,812<br>End2: 43,740,235<br>Percent Identity: 85<br>Distance: 322<br>43,728,600 - 43,729,065<br>Type: Tandem<br>Score: 620<br>Percent Identity: 89<br>Number of Repeats: 6.5<br>Size per Repeat: 71<br>Total Length: 466<br>43,738,780 - 43,739,021<br>Type: Tandem<br>Score: 416<br>Percent Identity: 95<br>Number of Repeats: 122<br>Size per Repeat: 2<br>Total Length: 242<br>43,740,300 - 43,741,269<br>Type: Tandem<br>Score: 915<br>Percent Identity: 80<br>Number of Repeats: 17.9<br>Size per Repeat: 55<br>Total Length: 970<br>43,740,300 - 43,741,269<br>Type: Tandem<br>Score: 926<br>Percent Identity: 78<br>Number of Repeats: 8.9<br>Size per Repeat: 108<br>Total Length: 970<br>NbL03g06100, model #1<br>Chr 3, w strand, position 43,725,098 - 43,734,866<br>Type: protein-coding43,700,000 - 43,700,499: 243,700,500 - 43,700,999: 11643,701,000 - 43,701,499: 1243,701,500 - 43,701,999: 843,703,000 - 43,703,499: 343,703,500 - 43,703,999: 743,704,000 - 43,704,499: 543,704,500 - 43,704,999: 343,705,000 - 43,705,499: 143,705,500 - 43,705,999: 243,706,000 - 43,706,499: 243,706,500 - 43,706,999: 17443,707,000 - 43,707,499: 15743,707,500 - 43,707,999: 343,708,000 - 43,708,499: 4843,708,500 - 43,708,999: 743,709,000 - 43,709,499: 743,709,500 - 43,709,999: 243,710,000 - 43,710,499: 443,711,000 - 43,711,499: 143,711,500 - 43,711,999: 743,712,000 - 43,712,499: 543,712,500 - 43,712,999: 1043,713,500 - 43,713,999: 243,714,000 - 43,714,499: 843,714,500 - 43,714,999: 343,715,000 - 43,715,499: 1343,715,500 - 43,715,999: 8543,716,000 - 43,716,499: 943,716,500 - 43,716,999: 343,717,000 - 43,717,499: 143,717,500 - 43,717,999: 243,718,000 - 43,718,499: 243,718,500 - 43,718,999: 343,719,000 - 43,719,499: 2143,719,500 - 43,719,999: 543,720,000 - 43,720,499: 343,721,000 - 43,721,499: 743,722,000 - 43,722,499: 443,723,000 - 43,723,499: 39543,723,500 - 43,723,999: 8443,724,000 - 43,724,499: 35043,724,500 - 43,724,999: 24743,725,000 - 43,725,499: 1243,725,500 - 43,725,999: 4543,726,000 - 43,726,499: 8243,726,500 - 43,726,999: 5743,727,000 - 43,727,499: 22443,727,500 - 43,727,999: 11243,728,000 - 43,728,499: 11143,729,000 - 43,729,499: 143,729,500 - 43,729,999: 543,730,000 - 43,730,499: 1643,731,500 - 43,731,999: 4343,732,000 - 43,732,499: 3743,732,500 - 43,732,999: 3443,733,000 - 43,733,499: 243,733,500 - 43,733,999: 2243,734,000 - 43,734,499: 3443,734,500 - 43,734,999: 9543,735,000 - 43,735,499: 45643,735,500 - 43,735,999: 9343,736,000 - 43,736,499: 643,736,500 - 43,736,999: 743,737,000 - 43,737,499: 343,737,500 - 43,737,999: 11143,738,000 - 43,738,499: 17543,738,500 - 43,738,999: 16143,739,000 - 43,739,499: 9943,739,500 - 43,739,999: 3443,740,000 - 43,740,499: 1,41243,740,500 - 43,740,999: 443,741,000 - 43,741,499: 943,741,500 - 43,741,999: 59943,742,000 - 43,742,499: 37443,742,500 - 43,742,999: 3043,743,000 - 43,743,499: 243,744,000 - 43,744,499: 5143,745,000 - 43,745,499: 1143,745,500 - 43,745,999: 5243,746,000 - 43,746,499: 9943,746,500 - 43,746,999: 2843,747,500 - 43,747,999: 1243,748,000 - 43,748,499: 443,748,500 - 43,748,999: 1543,749,000 - 43,749,499: 843,749,500 - 43,749,999: 843,700,000 - 43,700,499: 743,700,500 - 43,700,999: 5643,701,000 - 43,701,499: 1443,701,500 - 43,701,999: 843,702,000 - 43,702,499: 243,703,000 - 43,703,499: 743,703,500 - 43,703,999: 2443,704,000 - 43,704,499: 443,704,500 - 43,704,999: 143,705,500 - 43,705,999: 643,706,000 - 43,706,499: 143,706,500 - 43,706,999: 19743,707,000 - 43,707,499: 10543,707,500 - 43,707,999: 143,708,000 - 43,708,499: 1643,708,500 - 43,708,999: 443,709,000 - 43,709,499: 343,709,500 - 43,709,999: 1643,710,000 - 43,710,499: 943,710,500 - 43,710,999: 143,711,000 - 43,711,499: 143,711,500 - 43,711,999: 1043,712,000 - 43,712,499: 143,712,500 - 43,712,999: 343,713,000 - 43,713,499: 243,713,500 - 43,713,999: 143,714,000 - 43,714,499: 843,715,000 - 43,715,499: 443,715,500 - 43,715,999: 2643,716,000 - 43,716,499: 2643,716,500 - 43,716,999: 443,717,500 - 43,717,999: 543,718,000 - 43,718,499: 10,58843,718,500 - 43,718,999: 2543,719,000 - 43,719,499: 643,719,500 - 43,719,999: 243,720,000 - 43,720,499: 143,720,500 - 43,720,999: 143,721,000 - 43,721,499: 343,721,500 - 43,721,999: 143,722,000 - 43,722,499: 143,722,500 - 43,722,999: 443,723,000 - 43,723,499: 4143,723,500 - 43,723,999: 3143,724,000 - 43,724,499: 16143,724,500 - 43,724,999: 10643,725,000 - 43,725,499: 2543,725,500 - 43,725,999: 943,726,000 - 43,726,499: 643,726,500 - 43,726,999: 15643,727,000 - 43,727,499: 5243,727,500 - 43,727,999: 5543,729,000 - 43,729,499: 143,729,500 - 43,729,999: 143,730,000 - 43,730,499: 343,730,500 - 43,730,999: 1043,731,000 - 43,731,499: 7943,732,000 - 43,732,499: 8943,732,500 - 43,732,999: 2543,733,000 - 43,733,499: 143,733,500 - 43,733,999: 243,734,000 - 43,734,499: 343,734,500 - 43,734,999: 4843,735,000 - 43,735,499: 9343,735,500 - 43,735,999: 2843,736,000 - 43,736,499: 343,736,500 - 43,736,999: 1543,737,000 - 43,737,499: 643,737,500 - 43,737,999: 743,738,000 - 43,738,499: 32043,738,500 - 43,738,999: 8843,739,000 - 43,739,499: 20743,739,500 - 43,739,999: 1943,740,000 - 43,740,499: 87143,740,500 - 43,740,999: 1743,741,000 - 43,741,499: 2143,741,500 - 43,741,999: 4,57743,742,000 - 43,742,499: 49443,742,500 - 43,742,999: 3143,743,000 - 43,743,499: 4343,743,500 - 43,743,999: 343,744,000 - 43,744,499: 2143,745,000 - 43,745,499: 443,745,500 - 43,745,999: 1043,746,000 - 43,746,499: 30943,747,000 - 43,747,499: 243,747,500 - 43,747,999: 1843,748,000 - 43,748,499: 4343,748,500 - 43,748,999: 643,749,000 - 43,749,499: 1743,749,500 - 43,749,999: 1 Chromosome map