N. benthi small RNA Chromosome Viewer

Below is a map of all the genes and reads that exist in the region of Chr 3, position 47,700,000 - 47,750,000. Use the chromosome image (linked to the intermediate-level viewer) to navigate. View a legend that explains the icons and colors in the image below.Adjust libraries/reads or change display options on the control panel.



0 - 5,000,0005,000,000 - 10,000,00010,000,000 - 15,000,00015,000,000 - 20,000,00020,000,000 - 25,000,00025,000,000 - 30,000,00030,000,000 - 35,000,00035,000,000 - 40,000,00040,000,000 - 45,000,00045,000,000 - 50,000,00050,000,000 - 55,000,00055,000,000 - 60,000,00060,000,000 - 65,000,00065,000,000 - 70,000,00070,000,000 - 75,000,00075,000,000 - 80,000,00080,000,000 - 85,000,00085,000,000 - 90,000,00090,000,000 - 95,000,00095,000,000 - 100,000,000100,000,000 - 105,000,000105,000,000 - 110,000,000110,000,000 - 115,000,000115,000,000 - 120,000,000120,000,000 - 125,000,000125,000,000 - 129,979,819 Clickable chromosome detail map for nbenthi_sRNA_SOL
Click to see list of reads47,730,681 - 47,730,776<br>Type: Retrotransposon<br>Score: 246<br>Strand: w<br>ID: SINE_SO<br>Class: SINE<br>47,702,906 - 47,703,442<br>Type: Tandem<br>Score: 889<br>Percent Identity: 92<br>Number of Repeats: 2<br>Size per Repeat: 270<br>Total Length: 537<br>47,726,332 - 47,726,622<br>Type: Tandem<br>Score: 519<br>Percent Identity: 95<br>Number of Repeats: 2<br>Size per Repeat: 145<br>Total Length: 291<br>47,736,548 - 47,736,933<br>Type: Tandem<br>Score: 603<br>Percent Identity: 90<br>Number of Repeats: 2<br>Size per Repeat: 191<br>Total Length: 386<br>47,745,574 - 47,746,958<br>Type: Tandem<br>Score: 1375<br>Percent Identity: 81<br>Number of Repeats: 25.1<br>Size per Repeat: 56<br>Total Length: 1385<br>47,745,574 - 47,746,965<br>Type: Tandem<br>Score: 1463<br>Percent Identity: 82<br>Number of Repeats: 6.3<br>Size per Repeat: 222<br>Total Length: 1392<br>NbL03g06430, model #1<br>Chr 3, w strand, position 47,721,200 - 47,724,121<br>Type: protein-coding47,700,000 - 47,700,499: 1347,700,500 - 47,700,999: 15347,701,000 - 47,701,499: 3447,701,500 - 47,701,999: 3147,702,000 - 47,702,499: 11547,702,500 - 47,702,999: 1347,703,000 - 47,703,499: 2047,703,500 - 47,703,999: 647,704,000 - 47,704,499: 19747,704,500 - 47,704,999: 2347,705,000 - 47,705,499: 25847,705,500 - 47,705,999: 19947,706,000 - 47,706,499: 58547,706,500 - 47,706,999: 247,708,000 - 47,708,499: 5047,708,500 - 47,708,999: 947,709,000 - 47,709,499: 1,25747,709,500 - 47,709,999: 11547,710,000 - 47,710,499: 4147,710,500 - 47,710,999: 3847,711,000 - 47,711,499: 15247,711,500 - 47,711,999: 5347,712,000 - 47,712,499: 5447,712,500 - 47,712,999: 5247,713,000 - 47,713,499: 14247,713,500 - 47,713,999: 12547,714,000 - 47,714,499: 1,97147,714,500 - 47,714,999: 72847,715,000 - 47,715,499: 1547,715,500 - 47,715,999: 6447,716,000 - 47,716,499: 7147,716,500 - 47,716,999: 2047,717,000 - 47,717,499: 247,717,500 - 47,717,999: 947,718,000 - 47,718,499: 5447,718,500 - 47,718,999: 4547,719,000 - 47,719,499: 3947,719,500 - 47,719,999: 29047,720,000 - 47,720,499: 41347,720,500 - 47,720,999: 147,721,000 - 47,721,499: 547,721,500 - 47,721,999: 1447,722,000 - 47,722,499: 1,50547,722,500 - 47,722,999: 1,85247,723,000 - 47,723,499: 37847,723,500 - 47,723,999: 73047,724,000 - 47,724,499: 147,724,500 - 47,724,999: 2447,725,000 - 47,725,499: 1047,725,500 - 47,725,999: 11347,726,000 - 47,726,499: 36647,726,500 - 47,726,999: 9747,727,000 - 47,727,499: 24947,727,500 - 47,727,999: 3747,728,000 - 47,728,499: 3447,728,500 - 47,728,999: 3047,729,000 - 47,729,499: 5747,729,500 - 47,729,999: 13647,730,000 - 47,730,499: 1547,730,500 - 47,730,999: 55447,731,000 - 47,731,499: 17147,731,500 - 47,731,999: 28547,732,000 - 47,732,499: 12947,732,500 - 47,732,999: 5847,733,000 - 47,733,499: 847,733,500 - 47,733,999: 4047,734,000 - 47,734,499: 32047,734,500 - 47,734,999: 647,735,000 - 47,735,499: 8947,735,500 - 47,735,999: 5847,736,000 - 47,736,499: 19947,736,500 - 47,736,999: 11547,737,000 - 47,737,499: 26447,737,500 - 47,737,999: 4147,738,000 - 47,738,499: 21447,738,500 - 47,738,999: 7247,739,000 - 47,739,499: 1547,739,500 - 47,739,999: 847,740,000 - 47,740,499: 1447,740,500 - 47,740,999: 847,741,000 - 47,741,499: 1547,741,500 - 47,741,999: 3747,742,000 - 47,742,499: 847,742,500 - 47,742,999: 2647,743,000 - 47,743,499: 2147,743,500 - 47,743,999: 1747,744,000 - 47,744,499: 18747,744,500 - 47,744,999: 33847,745,000 - 47,745,499: 50047,745,500 - 47,745,999: 3247,746,000 - 47,746,499: 6447,746,500 - 47,746,999: 2847,747,000 - 47,747,499: 1347,747,500 - 47,747,999: 59147,748,000 - 47,748,499: 1147,748,500 - 47,748,999: 5547,749,000 - 47,749,499: 3047,749,500 - 47,749,999: 1247,700,000 - 47,700,499: 2147,700,500 - 47,700,999: 9247,701,000 - 47,701,499: 23147,701,500 - 47,701,999: 647,702,000 - 47,702,499: 1147,702,500 - 47,702,999: 2347,703,000 - 47,703,499: 747,703,500 - 47,703,999: 447,704,000 - 47,704,499: 9647,704,500 - 47,704,999: 3047,705,000 - 47,705,499: 17447,705,500 - 47,705,999: 40647,706,000 - 47,706,499: 25347,706,500 - 47,706,999: 447,707,500 - 47,707,999: 747,708,000 - 47,708,499: 3447,708,500 - 47,708,999: 1247,709,000 - 47,709,499: 42047,709,500 - 47,709,999: 6547,710,000 - 47,710,499: 3047,710,500 - 47,710,999: 847,711,000 - 47,711,499: 22947,711,500 - 47,711,999: 69647,712,000 - 47,712,499: 3547,712,500 - 47,712,999: 1547,713,000 - 47,713,499: 3747,713,500 - 47,713,999: 19847,714,000 - 47,714,499: 30147,714,500 - 47,714,999: 87447,715,000 - 47,715,499: 6647,715,500 - 47,715,999: 3247,716,000 - 47,716,499: 1247,716,500 - 47,716,999: 6647,717,000 - 47,717,499: 547,717,500 - 47,717,999: 1947,718,000 - 47,718,499: 5847,718,500 - 47,718,999: 2947,719,000 - 47,719,499: 3847,719,500 - 47,719,999: 12347,720,000 - 47,720,499: 62947,720,500 - 47,720,999: 647,721,500 - 47,721,999: 1547,722,000 - 47,722,499: 69747,722,500 - 47,722,999: 2,74447,723,000 - 47,723,499: 15547,723,500 - 47,723,999: 1,01147,724,000 - 47,724,499: 147,724,500 - 47,724,999: 447,725,000 - 47,725,499: 1347,725,500 - 47,725,999: 48747,726,000 - 47,726,499: 10247,726,500 - 47,726,999: 3147,727,000 - 47,727,499: 22447,727,500 - 47,727,999: 15347,728,000 - 47,728,499: 3247,728,500 - 47,728,999: 3347,729,000 - 47,729,499: 3947,729,500 - 47,729,999: 17847,730,000 - 47,730,499: 1147,730,500 - 47,730,999: 12047,731,000 - 47,731,499: 2,18847,731,500 - 47,731,999: 7747,732,000 - 47,732,499: 43547,732,500 - 47,732,999: 1347,733,000 - 47,733,499: 2647,733,500 - 47,733,999: 4647,734,000 - 47,734,499: 15947,734,500 - 47,734,999: 1847,735,000 - 47,735,499: 10647,735,500 - 47,735,999: 4447,736,000 - 47,736,499: 28047,736,500 - 47,736,999: 5047,737,000 - 47,737,499: 39747,737,500 - 47,737,999: 347,738,000 - 47,738,499: 21147,738,500 - 47,738,999: 16047,739,000 - 47,739,499: 747,739,500 - 47,739,999: 2647,740,000 - 47,740,499: 4747,740,500 - 47,740,999: 4647,741,000 - 47,741,499: 1247,741,500 - 47,741,999: 1447,742,000 - 47,742,499: 2447,742,500 - 47,742,999: 8347,743,000 - 47,743,499: 5147,743,500 - 47,743,999: 1947,744,000 - 47,744,499: 13547,744,500 - 47,744,999: 55647,745,000 - 47,745,499: 2,12647,745,500 - 47,745,999: 14747,746,000 - 47,746,499: 15947,746,500 - 47,746,999: 10547,747,000 - 47,747,499: 3047,747,500 - 47,747,999: 5,53247,748,000 - 47,748,499: 247,748,500 - 47,748,999: 3247,749,000 - 47,749,499: 1447,749,500 - 47,749,999: 10 Chromosome map