Arabidopsis small RNA PHAS Loci
Each abundance value is from all libraries, but it is linked to the list of abundances and distinct read counts of individual libraries.
See more lists of genomic-specific PHAS loci
| ID | Chr | Start | End | Phase len | Title | Abundance |
|---|---|---|---|---|---|---|
| AT2G27400 | 2 | 11,721,478 | 11,722,200 | 21 | TAS1a | 149,812 |
| AT1G50055 | 1 | 18,549,174 | 18,550,021 | 21 | TAS1b | 89,045 |
| AT2G39670 | 2 | 16,537,395 | 16,538,247 | 21 | TAS1c | 335,998 |
| AT2G39681 | 2 | 16,539,379 | 16,540,141 | 21 | TAS2 | 381,839 |
| AT3G17185 | 3 | 5,862,002 | 5,862,422 | 21 | TAS3a | 186,074 |
| AT5G49615 | 5 | 20,134,200 | 20,134,786 | 21 | TAS3b | 28,856 |
| AT5G57735 | 5 | 23,394,162 | 23,394,605 | 21 | TAS3c | 5,204 |
| AT3G25795 | 3 | 9,417,565 | 9,417,831 | 21 | TAS4 | 1,992 |
| AT1G12300 | 1 | 4,184,297 | 4,184,893 | 21 | Tetratricopeptide repeat (TPR)-like superfamily protein | 1,093 |
| AT1G12620 | 1 | 4,295,812 | 4,296,242 | 21 | Pentatricopeptide repeat (PPR) superfamily protein | 1,545 |
| AT1G12775 | 1 | 4,354,454 | 4,355,366 | 21 | Pentatricopeptide repeat (PPR) superfamily protein | 6,164 |
| AT1G62590 | 1 | 23,177,539 | 23,178,770 | 21 | pentatricopeptide (PPR) repeat-containing protein | 29,634 |
| AT1G62910 | 1 | 23,299,482 | 23,300,923 | 21 | Pentatricopeptide repeat (PPR) superfamily protein | 94,748 |
| AT1G62914 | 1 | 23,302,102 | 23,303,249 | 21 | pentatricopeptide (PPR) repeat-containing protein | 70,180 |
| AT1G62930 | 1 | 23,307,119 | 23,308,391 | 21 | Tetratricopeptide repeat (TPR)-like superfamily protein | 80,967 |
| AT1G63070 | 1 | 23,385,429 | 23,386,734 | 21 | pentatricopeptide (PPR) repeat-containing protein | 42,062 |
| AT1G63080 | 1 | 23,388,907 | 23,390,325 | 21 | Pentatricopeptide repeat (PPR) superfamily protein | 92,650 |
| AT1G63130 | 1 | 23,413,268 | 23,414,822 | 21 | Tetratricopeptide repeat (TPR)-like superfamily protein | 97,988 |
| AT1G63150 | 1 | 23,419,823 | 23,421,304 | 21 | Tetratricopeptide repeat (TPR)-like superfamily protein | 50,522 |
| AT1G63230 | 1 | 23,451,214 | 23,451,933 | 21 | Tetratricopeptide repeat (TPR)-like superfamily protein | 3,271 |
| AT1G63330 | 1 | 23,490,092 | 23,491,519 | 21 | Pentatricopeptide repeat (PPR) superfamily protein | 30,654 |
| AT1G63400 | 1 | 23,507,797 | 23,509,079 | 21 | Pentatricopeptide repeat (PPR) superfamily protein | 71,903 |
| AT5G16640 | 5 | 5,461,556 | 5,461,950 | 21 | Pentatricopeptide repeat (PPR) superfamily protein | 2,353 |
| AT5G60450 | 5 | 24,309,370 | 24,309,748 | 21 | auxin response factor 4 | 2,236 |
| AT3G26810 | 3 | 9,870,223 | 9,870,648 | 21 | auxin signaling F-box 2 | 3,797 |
| AT1G12820 | 1 | 4,368,691 | 4,369,161 | 21 | auxin signaling F-box 3 | 10,150 |
| AT5G38850 | 5 | 15,555,417 | 15,555,609 | 21 | Disease resistance protein (TIR-NBS-LRR class) | 2,118 |
| AT5G43730 | 5 | 17,560,831 | 17,561,755 | 21 | Disease resistance protein (CC-NBS-LRR class) family | 4,972 |
| AT5G43740 | 5 | 17,566,571 | 17,568,621 | 21 | Disease resistance protein (CC-NBS-LRR class) family | 6,237 |
| AT3G23690 | 3 | 8,529,871 | 8,530,059 | 21 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1,768 |
| AT3G23690 | 3 | 8,530,232 | 8,530,633 | 21 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 3,863 |
| AT5G41610 | 5 | 16,639,263 | 16,640,851 | 21 | cation/H+ exchanger 18 | 14,141 |
| AT1G48410 | 1 | 17,891,261 | 17,891,567 | 21 | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 2,765 |
| AT1G62670 | 1 | 23,205,003 | 23,206,089 | 21 | rna processing factor 2 | 35,247 |
| AT3G06435 | 3 | 1,970,285 | 1,970,424 | 21 | Expressed protein | 81,958 |
| AT5G27660 | 5 | 9,789,488 | 9,789,642 | 21 | Trypsin family protein with PDZ domain | 6,293 |
| AT5G39370 | 5 | 15,757,574 | 15,758,240 | 21 | Curculin-like (mannose-binding) lectin family protein | 39,198 |